The 2.0 version of rSNPBase

Variant report

Variant rs2967509
Chromosome Location chr19:36869007-36869008
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36830600-36869400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:36858000-36869400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr19:36858400-36869400 Weak transcription Left Ventricle heart
4 chr19:36858600-36869200 Weak transcription Pancreas Pancrea
5 chr19:36858600-36869200 Weak transcription Right Ventricle heart
6 chr19:36861800-36869200 Weak transcription Aorta Aorta
7 chr19:36865200-36869400 Weak transcription Lung lung
8 chr19:36868000-36869200 Enhancers Primary T cells fromperipheralblood blood
9 chr19:36868000-36869200 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr19:36868000-36869200 Enhancers Psoas Muscle Psoas
11 chr19:36868400-36869200 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr19:36868400-36869200 Enhancers Ovary ovary
13 chr19:36868400-36869200 Enhancers Rectal Mucosa Donor 31 rectum
14 chr19:36868400-36869400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr19:36868400-36869400 Flanking Active TSS Colon Smooth Muscle Colon
16 chr19:36868600-36869200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
17 chr19:36868600-36869200 Enhancers Primary B cells from peripheral blood blood
18 chr19:36868600-36869200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr19:36868600-36869200 Flanking Active TSS Fetal Kidney kidney
20 chr19:36868600-36869200 Enhancers Placenta Placenta
21 chr19:36868600-36869200 Enhancers Right Atrium heart
22 chr19:36868600-36869200 Enhancers Skeletal Muscle Female skeletal muscle
23 chr19:36868600-36869200 Flanking Active TSS HepG2 liver
24 chr19:36868600-36869200 Flanking Active TSS HSMM muscle
25 chr19:36868600-36869400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr19:36868600-36869400 Enhancers Primary monocytes fromperipheralblood blood
27 chr19:36868600-36869400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr19:36868600-36869400 Flanking Active TSS Brain Anterior Caudate brain
29 chr19:36868600-36869400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr19:36868600-36869400 Flanking Active TSS Fetal Lung lung
31 chr19:36868600-36869400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
32 chr19:36868600-36869400 Enhancers Small Intestine intestine
33 chr19:36868600-36869400 Flanking Active TSS Hela-S3 cervix
34 chr19:36868600-36869400 Flanking Active TSS NHEK skin
35 chr19:36868600-36869600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr19:36868600-36869600 Flanking Active TSS Liver Liver
37 chr19:36868600-36869600 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr19:36868600-36869800 Flanking Active TSS Dnd41 blood
39 chr19:36868600-36870800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr19:36868800-36869200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
41 chr19:36868800-36869200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr19:36868800-36869200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr19:36868800-36869200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
44 chr19:36868800-36869200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr19:36868800-36869200 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr19:36868800-36869200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr19:36868800-36869200 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr19:36868800-36869200 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr19:36868800-36869200 Flanking Active TSS Brain Angular Gyrus brain
50 chr19:36868800-36869200 Flanking Active TSS Fetal Muscle Leg muscle

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Last update: Aug 31, 2015