Variant report
Variant | rs2972550 |
---|---|
Chromosome Location | chr19:36748838-36748839 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:36739600-36756800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
2 | chr19:36745400-36749200 | ZNF genes & repeats | Pancreas | Pancrea |
3 | chr19:36745800-36750600 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
4 | chr19:36746200-36749400 | ZNF genes & repeats | Fetal Stomach | stomach |
5 | chr19:36747000-36750000 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
6 | chr19:36747600-36749200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
7 | chr19:36747600-36749200 | Enhancers | Fetal Brain Male | brain |
8 | chr19:36747600-36749400 | ZNF genes & repeats | Lung | lung |
9 | chr19:36747800-36749000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
10 | chr19:36747800-36749000 | Active TSS | Brain Substantia Nigra | brain |
11 | chr19:36747800-36749200 | Active TSS | H9 Cell Line | embryonic stem cell |
12 | chr19:36747800-36749200 | Active TSS | HUES48 Cell Line | embryonic stem cell |
13 | chr19:36747800-36749200 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
14 | chr19:36747800-36749400 | Active TSS | HUES6 Cell Line | embryonic stem cell |
15 | chr19:36747800-36749400 | Transcr. at gene 5' and 3' | iPS DF 19.11 Cell Line | embryonic stem cell |
16 | chr19:36747800-36749400 | Active TSS | Brain Inferior Temporal Lobe | brain |
17 | chr19:36747800-36749600 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
18 | chr19:36747800-36749600 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
19 | chr19:36747800-36749600 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
20 | chr19:36747800-36749800 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
21 | chr19:36747800-36749800 | ZNF genes & repeats | Foreskin Keratinocyte Primary Cells skin03 | Skin |
22 | chr19:36748000-36749000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
23 | chr19:36748000-36749000 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
24 | chr19:36748000-36749000 | Active TSS | Brain Anterior Caudate | brain |
25 | chr19:36748000-36749000 | Active TSS | Brain Cingulate Gyrus | brain |
26 | chr19:36748000-36749000 | ZNF genes & repeats | Esophagus | oesophagus |
27 | chr19:36748000-36749000 | Active TSS | Fetal Brain Female | brain |
28 | chr19:36748000-36749000 | ZNF genes & repeats | Fetal Intestine Large | intestine |
29 | chr19:36748000-36749000 | Active TSS | Fetal Muscle Leg | muscle |
30 | chr19:36748000-36749000 | Active TSS | Left Ventricle | heart |
31 | chr19:36748000-36749000 | Active TSS | Ovary | ovary |
32 | chr19:36748000-36749000 | Active TSS | Rectal Smooth Muscle | rectum |
33 | chr19:36748000-36749200 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
34 | chr19:36748000-36749200 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
35 | chr19:36748000-36749200 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
36 | chr19:36748000-36749200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
37 | chr19:36748000-36749200 | Active TSS | Brain Hippocampus Middle | brain |
38 | chr19:36748000-36749200 | Active TSS | Fetal Kidney | kidney |
39 | chr19:36748000-36749200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
40 | chr19:36748000-36749200 | Active TSS | Stomach Smooth Muscle | stomach |
41 | chr19:36748000-36749600 | ZNF genes & repeats | Liver | Liver |
42 | chr19:36748000-36749600 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
43 | chr19:36748200-36749000 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
44 | chr19:36748200-36749000 | Active TSS | Fetal Intestine Small | intestine |
45 | chr19:36748200-36749000 | Active TSS | Fetal Muscle Trunk | muscle |
46 | chr19:36748200-36749200 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
47 | chr19:36748200-36749200 | Active TSS | Colon Smooth Muscle | Colon |
48 | chr19:36748200-36749200 | ZNF genes & repeats | HMEC | breast |
49 | chr19:36748200-36749400 | ZNF genes & repeats | Foreskin Keratinocyte Primary Cells skin02 | Skin |
50 | chr19:36748200-36749400 | Active TSS | Brain Germinal Matrix | brain |