Variant report

Variant rs2972550
Chromosome Location chr19:36748838-36748839
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36739600-36756800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr19:36745400-36749200 ZNF genes & repeats Pancreas Pancrea
3 chr19:36745800-36750600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:36746200-36749400 ZNF genes & repeats Fetal Stomach stomach
5 chr19:36747000-36750000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
6 chr19:36747600-36749200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:36747600-36749200 Enhancers Fetal Brain Male brain
8 chr19:36747600-36749400 ZNF genes & repeats Lung lung
9 chr19:36747800-36749000 Active TSS Breast Myoepithelial Primary Cells Breast
10 chr19:36747800-36749000 Active TSS Brain Substantia Nigra brain
11 chr19:36747800-36749200 Active TSS H9 Cell Line embryonic stem cell
12 chr19:36747800-36749200 Active TSS HUES48 Cell Line embryonic stem cell
13 chr19:36747800-36749200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr19:36747800-36749400 Active TSS HUES6 Cell Line embryonic stem cell
15 chr19:36747800-36749400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
16 chr19:36747800-36749400 Active TSS Brain Inferior Temporal Lobe brain
17 chr19:36747800-36749600 ZNF genes & repeats H1 Cell Line embryonic stem cell
18 chr19:36747800-36749600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:36747800-36749600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr19:36747800-36749800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr19:36747800-36749800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:36748000-36749000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr19:36748000-36749000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr19:36748000-36749000 Active TSS Brain Anterior Caudate brain
25 chr19:36748000-36749000 Active TSS Brain Cingulate Gyrus brain
26 chr19:36748000-36749000 ZNF genes & repeats Esophagus oesophagus
27 chr19:36748000-36749000 Active TSS Fetal Brain Female brain
28 chr19:36748000-36749000 ZNF genes & repeats Fetal Intestine Large intestine
29 chr19:36748000-36749000 Active TSS Fetal Muscle Leg muscle
30 chr19:36748000-36749000 Active TSS Left Ventricle heart
31 chr19:36748000-36749000 Active TSS Ovary ovary
32 chr19:36748000-36749000 Active TSS Rectal Smooth Muscle rectum
33 chr19:36748000-36749200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr19:36748000-36749200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr19:36748000-36749200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:36748000-36749200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr19:36748000-36749200 Active TSS Brain Hippocampus Middle brain
38 chr19:36748000-36749200 Active TSS Fetal Kidney kidney
39 chr19:36748000-36749200 Active TSS Pancreatic Islets Pancreatic Islet
40 chr19:36748000-36749200 Active TSS Stomach Smooth Muscle stomach
41 chr19:36748000-36749600 ZNF genes & repeats Liver Liver
42 chr19:36748000-36749600 ZNF genes & repeats Duodenum Mucosa Duodenum
43 chr19:36748200-36749000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
44 chr19:36748200-36749000 Active TSS Fetal Intestine Small intestine
45 chr19:36748200-36749000 Active TSS Fetal Muscle Trunk muscle
46 chr19:36748200-36749200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:36748200-36749200 Active TSS Colon Smooth Muscle Colon
48 chr19:36748200-36749200 ZNF genes & repeats HMEC breast
49 chr19:36748200-36749400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr19:36748200-36749400 Active TSS Brain Germinal Matrix brain

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