The 2.0 version of rSNPBase

Variant report

Variant rs2980623
Chromosome Location chr8:110308328-110308329
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:110211200-110311600 Weak transcription Right Ventricle heart
2 chr8:110236200-110308800 Weak transcription Thymus Thymus
3 chr8:110236200-110309200 Weak transcription Stomach Smooth Muscle stomach
4 chr8:110236600-110344200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr8:110238000-110311600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr8:110247000-110311400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr8:110258400-110311200 Weak transcription Lung lung
8 chr8:110278200-110311200 Weak transcription H9 Cell Line embryonic stem cell
9 chr8:110284400-110344400 Weak transcription Fetal Lung lung
10 chr8:110285600-110311400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr8:110286400-110311400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr8:110288200-110311800 Weak transcription K562 blood
13 chr8:110288600-110344200 Weak transcription Ovary ovary
14 chr8:110289200-110311200 Weak transcription Gastric stomach
15 chr8:110292000-110333200 Weak transcription HepG2 liver
16 chr8:110292800-110311400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr8:110293000-110343600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr8:110293400-110309200 Weak transcription Liver Liver
19 chr8:110294200-110311000 Weak transcription Fetal Intestine Small intestine
20 chr8:110294200-110311600 Weak transcription HSMM muscle
21 chr8:110294600-110311200 Weak transcription Esophagus oesophagus
22 chr8:110294600-110314600 Weak transcription Pancreas Pancrea
23 chr8:110296000-110311400 Weak transcription Duodenum Mucosa Duodenum
24 chr8:110296200-110310400 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr8:110296600-110309000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr8:110296800-110311200 Weak transcription H1 Cell Line embryonic stem cell
27 chr8:110297800-110311400 Weak transcription Small Intestine intestine
28 chr8:110299600-110309000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr8:110300000-110310000 Weak transcription Primary B cells from peripheral blood blood
30 chr8:110300000-110311000 Weak transcription Fetal Intestine Large intestine
31 chr8:110300000-110311200 Weak transcription Adipose Nuclei Adipose
32 chr8:110300000-110311400 Weak transcription Left Ventricle heart
33 chr8:110302600-110312000 Weak transcription Placenta Placenta
34 chr8:110303000-110313200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr8:110304600-110313200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr8:110305200-110318200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr8:110305600-110317800 Weak transcription Osteobl bone
38 chr8:110305600-110318200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr8:110305800-110308400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr8:110305800-110308600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr8:110305800-110310800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr8:110305800-110311000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr8:110305800-110311400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr8:110306000-110309800 Weak transcription Primary T cells from cord blood blood
45 chr8:110306200-110308800 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr8:110306200-110310600 Weak transcription A549 lung
47 chr8:110306200-110312200 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr8:110306200-110314000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr8:110306200-110316600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr8:110306400-110312400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015