Variant report

Variant	rs3010312
Chromosome Location	chr6:139759781-139759782
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1019237	0.89[CEU][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2005734	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2908495	0.89[CEU][hapmap];0.87[YRI][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2908496	0.94[CEU][hapmap];0.95[YRI][hapmap];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2908499	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2908510	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3010304	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3010308	0.84[CEU][hapmap]
rs3010316	0.89[CEU][hapmap];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3095426	0.94[CEU][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs887780	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139755000-139760000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:139755200-139760400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr6:139755400-139764600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:139755600-139760600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr6:139755600-139763200	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr6:139756000-139760400	Weak transcription	K562	blood
7	chr6:139757800-139760400	Weak transcription	Fetal Stomach	stomach
8	chr6:139758200-139760000	Enhancers	Fetal Heart	heart
9	chr6:139758200-139764200	Weak transcription	Fetal Kidney	kidney
10	chr6:139758400-139763400	Weak transcription	Placenta	Placenta
11	chr6:139758400-139764600	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr6:139759600-139759800	Enhancers	Pancreas	Pancrea
13	chr6:139759600-139760400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr6:139759600-139761200	Enhancers	Colon Smooth Muscle	Colon
15	chr6:139759600-139761800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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