Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1436166	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2016652	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2574874	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2574876	0.86[ASN][1000 genomes]
rs2574877	0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2574879	0.84[ASN][1000 genomes]
rs2662906	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2662907	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2662923	0.84[ASN][1000 genomes]
rs2662924	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2662925	0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2662927	0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2802552	0.88[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2802556	0.88[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2802558	0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2802559	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2802561	0.91[AMR][1000 genomes]
rs2802562	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2802563	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2802744	0.86[ASN][1000 genomes]
rs2997478	0.89[ASN][1000 genomes]
rs2997499	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2997501	0.88[ASN][1000 genomes]
rs3012182	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3012183	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524125	chr1:224902054-225021860	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224944800-224954800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:224948000-224956800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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