Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:133320939..133323538-chr6:133327450..133329391,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1114622	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1459239	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs271166	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap]
rs271167	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs271168	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs271171	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs271172	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2926345	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2926350	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2926351	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3012464	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3012473	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3012474	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4285336	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4571580	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4640903	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6569865	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7740210	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7740263	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9483524	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532069	chr6:132776411-133462292	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv428154	chr6:133271975-133522803	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	nsv5481	chr6:133311665-133374548	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133326800-133328400	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr6:133327800-133328400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr6:133327800-133328400	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr6:133328000-133328400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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