Variant report

Variant rs3087534
Chromosome Location chr17:44198806-44198807
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44144200-44206000 Weak transcription Esophagus oesophagus
2 chr17:44172000-44199600 Weak transcription Placenta Placenta
3 chr17:44175400-44199600 Enhancers Primary T helper cells PMA-I stimulated --
4 chr17:44179000-44199200 Weak transcription Primary hematopoietic stem cells blood
5 chr17:44180200-44214400 Weak transcription Hela-S3 cervix
6 chr17:44180600-44201800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr17:44184600-44201000 Weak transcription Dnd41 blood
8 chr17:44185800-44203400 Weak transcription Lung lung
9 chr17:44186600-44199600 Weak transcription Fetal Muscle Leg muscle
10 chr17:44186600-44210000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr17:44187200-44200000 Weak transcription Gastric stomach
12 chr17:44187200-44200800 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr17:44187400-44200800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr17:44188800-44199400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr17:44189200-44205800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr17:44190800-44209200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr17:44191400-44200800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr17:44192400-44200800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr17:44192800-44201000 Enhancers Brain Substantia Nigra brain
20 chr17:44193000-44231400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr17:44193200-44232200 Enhancers Primary T helper cells fromperipheralblood blood
22 chr17:44193400-44199800 Weak transcription Fetal Kidney kidney
23 chr17:44193400-44201000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr17:44193400-44202000 Weak transcription NH-A brain
25 chr17:44193600-44199200 Weak transcription Osteobl bone
26 chr17:44194000-44199600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr17:44194000-44200400 Enhancers Skeletal Muscle Female skeletal muscle
28 chr17:44194000-44207200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr17:44194200-44202200 Enhancers Colon Smooth Muscle Colon
30 chr17:44194200-44248200 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr17:44194400-44199400 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr17:44194400-44204600 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr17:44194600-44205000 Weak transcription Pancreas Pancrea
34 chr17:44194600-44208000 Weak transcription NHLF lung
35 chr17:44194600-44210600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr17:44194800-44201000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr17:44194800-44201000 Weak transcription NHEK skin
38 chr17:44194800-44202000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr17:44194800-44214400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr17:44195400-44200000 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr17:44195600-44200400 Enhancers HepG2 liver
42 chr17:44195800-44199200 Weak transcription Fetal Intestine Large intestine
43 chr17:44196000-44199000 Weak transcription Fetal Stomach stomach
44 chr17:44196200-44200400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr17:44196200-44201000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr17:44196200-44206000 Weak transcription H9 Cell Line embryonic stem cell
47 chr17:44196200-44206200 Weak transcription Brain Germinal Matrix brain
48 chr17:44196200-44207400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr17:44196400-44199000 Weak transcription A549 lung
50 chr17:44196400-44199800 Weak transcription HUES48 Cell Line embryonic stem cell

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