The 2.0 version of rSNPBase

Variant report

Variant rs3088374
Chromosome Location chr2:128062048-128062049
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128052000-128066200 Weak transcription Spleen Spleen
2 chr2:128052200-128062600 Weak transcription Colon Smooth Muscle Colon
3 chr2:128052200-128062600 Weak transcription Fetal Muscle Trunk muscle
4 chr2:128052200-128062600 Weak transcription Thymus Thymus
5 chr2:128052200-128062800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr2:128052200-128063200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr2:128052200-128063600 Weak transcription Brain Hippocampus Middle brain
8 chr2:128052200-128063600 Weak transcription Left Ventricle heart
9 chr2:128052200-128063600 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:128052200-128063800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:128052200-128065000 Weak transcription Aorta Aorta
12 chr2:128052200-128065000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:128052200-128066000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr2:128052200-128066200 Weak transcription Small Intestine intestine
15 chr2:128052400-128062600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:128052400-128062600 Weak transcription Brain Inferior Temporal Lobe brain
17 chr2:128052400-128062800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr2:128052400-128062800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr2:128052400-128063000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr2:128052400-128063200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:128052400-128063400 Weak transcription Psoas Muscle Psoas
22 chr2:128052400-128063600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr2:128052400-128063600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:128052400-128063600 Weak transcription Fetal Brain Female brain
25 chr2:128052400-128063600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr2:128052400-128063800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:128052400-128063800 Weak transcription Brain Substantia Nigra brain
28 chr2:128052400-128064800 Weak transcription NH-A brain
29 chr2:128052400-128065000 Weak transcription Fetal Stomach stomach
30 chr2:128052400-128070400 Weak transcription Esophagus oesophagus
31 chr2:128052400-128070800 Weak transcription Colonic Mucosa Colon
32 chr2:128052400-128071200 Weak transcription Fetal Brain Male brain
33 chr2:128052600-128062600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:128052600-128062600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr2:128052600-128062600 Weak transcription Fetal Thymus thymus
36 chr2:128052600-128062800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:128052600-128063000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:128052600-128063000 Weak transcription Adipose Nuclei Adipose
39 chr2:128052600-128063400 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr2:128052600-128063600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:128052600-128063600 Weak transcription HSMM muscle
42 chr2:128052600-128063800 Weak transcription Brain Germinal Matrix brain
43 chr2:128052600-128063800 Weak transcription Fetal Muscle Leg muscle
44 chr2:128052600-128064200 Weak transcription Muscle Satellite Cultured Cells --
45 chr2:128052600-128067200 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr2:128052600-128068400 Weak transcription Right Ventricle heart
47 chr2:128052800-128062200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr2:128052800-128062400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr2:128052800-128062600 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr2:128052800-128062800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015