The 2.0 version of rSNPBase

Variant report

Variant rs3105192
Chromosome Location chr8:100446076-100446077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100399800-100498400 Weak transcription Thymus Thymus
2 chr8:100419600-100463600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr8:100421000-100448400 Weak transcription NH-A brain
4 chr8:100421600-100472800 Weak transcription Aorta Aorta
5 chr8:100426000-100466200 Weak transcription Primary T cells fromperipheralblood blood
6 chr8:100428600-100456400 Weak transcription Fetal Stomach stomach
7 chr8:100428600-100466600 Weak transcription Spleen Spleen
8 chr8:100440600-100448400 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr8:100443400-100447400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr8:100443800-100447200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr8:100443800-100447400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr8:100443800-100493800 Weak transcription Pancreas Pancrea
13 chr8:100444000-100459000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr8:100444400-100446600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr8:100444400-100446600 ZNF genes & repeats Primary B cells from peripheral blood blood
16 chr8:100444600-100446400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
17 chr8:100444600-100447200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr8:100444600-100447200 ZNF genes & repeats Fetal Intestine Large intestine
19 chr8:100444800-100446600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr8:100445000-100446200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
21 chr8:100445000-100446200 ZNF genes & repeats Primary hematopoietic stem cells blood
22 chr8:100445000-100446200 Strong transcription Placenta Amnion Placenta Amnion
23 chr8:100445000-100447000 Strong transcription HSMM muscle
24 chr8:100445200-100446200 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
25 chr8:100445200-100446200 ZNF genes & repeats Fetal Thymus thymus
26 chr8:100445200-100446200 ZNF genes & repeats Ovary ovary
27 chr8:100445200-100446400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr8:100445200-100446600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr8:100445200-100446600 ZNF genes & repeats Fetal Muscle Leg muscle
30 chr8:100445600-100446600 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr8:100445600-100446600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr8:100445600-100446800 Weak transcription Adipose Nuclei Adipose
33 chr8:100445600-100447600 Strong transcription Primary B cells from cord blood blood
34 chr8:100445600-100448200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr8:100445600-100449600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr8:100445600-100450200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr8:100445600-100450200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr8:100445600-100451400 Weak transcription Fetal Kidney kidney
39 chr8:100445600-100451800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr8:100445600-100452000 Weak transcription Muscle Satellite Cultured Cells --
41 chr8:100445600-100452000 Weak transcription NHLF lung
42 chr8:100445600-100452000 Weak transcription Osteobl bone
43 chr8:100445600-100452400 Weak transcription Psoas Muscle Psoas
44 chr8:100445600-100454600 Weak transcription Brain Substantia Nigra brain
45 chr8:100445600-100455600 Weak transcription Small Intestine intestine
46 chr8:100445600-100456200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr8:100445600-100456800 Weak transcription Left Ventricle heart
48 chr8:100445600-100459200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr8:100445600-100459400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr8:100445600-100460000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015