Variant report

Variant rs3108317
Chromosome Location chr17:43719870-43719871
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43699800-43722000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr17:43708800-43721400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr17:43708800-43723800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr17:43708800-43726200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr17:43709600-43720200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr17:43709800-43720800 Weak transcription NHEK skin
7 chr17:43709800-43723600 Weak transcription HSMM muscle
8 chr17:43710000-43723800 Weak transcription Brain Cingulate Gyrus brain
9 chr17:43711800-43724000 Weak transcription Brain Angular Gyrus brain
10 chr17:43714000-43720000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr17:43714000-43725000 Weak transcription Fetal Brain Male brain
12 chr17:43714000-43726200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr17:43714200-43727800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr17:43714400-43724000 Weak transcription Ovary ovary
15 chr17:43715000-43723600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr17:43715000-43725800 Weak transcription H1 Cell Line embryonic stem cell
17 chr17:43715000-43727000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr17:43715200-43720200 Weak transcription Left Ventricle heart
19 chr17:43715200-43720800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr17:43715200-43722000 Weak transcription Brain Substantia Nigra brain
21 chr17:43715200-43723200 Weak transcription Brain Hippocampus Middle brain
22 chr17:43715200-43723800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr17:43715200-43723800 Weak transcription Pancreas Pancrea
24 chr17:43715200-43726400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr17:43715200-43726400 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr17:43715200-43727200 Weak transcription Spleen Spleen
27 chr17:43716400-43736600 Weak transcription Right Atrium heart
28 chr17:43717000-43721600 Weak transcription Fetal Intestine Large intestine
29 chr17:43717000-43722000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr17:43717000-43723600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr17:43717200-43720000 Weak transcription Thymus Thymus
32 chr17:43717200-43720200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr17:43717200-43722600 Weak transcription Fetal Brain Female brain
34 chr17:43717200-43723600 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr17:43717200-43723800 Weak transcription Fetal Muscle Trunk muscle
36 chr17:43717200-43728000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:43717400-43720000 Weak transcription Fetal Muscle Leg muscle
38 chr17:43717600-43720000 Weak transcription Primary T cells from cord blood blood
39 chr17:43717600-43720600 Weak transcription Primary B cells from cord blood blood
40 chr17:43717600-43720800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr17:43717800-43721000 Weak transcription Fetal Stomach stomach
42 chr17:43717800-43721200 Weak transcription Stomach Smooth Muscle stomach
43 chr17:43717800-43723800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr17:43718000-43721000 Weak transcription Fetal Intestine Small intestine
45 chr17:43718000-43722800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr17:43718000-43723600 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr17:43718000-43723800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr17:43718000-43726000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr17:43718200-43723600 Weak transcription Primary T cells fromperipheralblood blood
50 chr17:43718200-43723600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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