Variant report

Variant	rs3111256
Chromosome Location	chr1:211416981-211416982
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:211416396..211423224-chr1:211428831..211433927,10	K562	blood:

Variant related genes	Relation type
ENSG00000117625	Chromatin interaction

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10732682	1.00[ASN][1000 genomes]
rs10746434	1.00[ASN][1000 genomes]
rs10779554	1.00[ASN][1000 genomes]
rs10779555	1.00[ASN][1000 genomes]
rs10863887	1.00[ASN][1000 genomes]
rs12043438	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12063878	1.00[ASN][1000 genomes]
rs12072778	0.81[EUR][1000 genomes]
rs1533219	1.00[ASN][1000 genomes]
rs1983259	1.00[ASN][1000 genomes]
rs1983260	1.00[ASN][1000 genomes]
rs2358215	1.00[ASN][1000 genomes]
rs3111242	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3111247	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3111248	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3111250	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3111254	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3120784	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3125828	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3125829	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3125834	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3125840	1.00[ASN][1000 genomes]
rs3125841	1.00[ASN][1000 genomes]
rs3855878	1.00[ASN][1000 genomes]
rs4347268	1.00[ASN][1000 genomes]
rs4370817	1.00[ASN][1000 genomes]
rs4396171	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4556425	1.00[ASN][1000 genomes]
rs4951517	1.00[ASN][1000 genomes]
rs4951735	1.00[ASN][1000 genomes]
rs4951737	1.00[ASN][1000 genomes]
rs4951738	1.00[ASN][1000 genomes]
rs4951739	1.00[ASN][1000 genomes]
rs4951740	1.00[ASN][1000 genomes]
rs61218213	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6540675	1.00[ASN][1000 genomes]
rs6540676	1.00[ASN][1000 genomes]
rs6540678	1.00[ASN][1000 genomes]
rs6657779	1.00[ASN][1000 genomes]
rs6663627	1.00[ASN][1000 genomes]
rs6671526	1.00[ASN][1000 genomes]
rs6688682	1.00[ASN][1000 genomes]
rs6692815	1.00[ASN][1000 genomes]
rs7517135	1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211412800-211421400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:211415200-211418600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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