Variant report

Variant	rs3111404
Chromosome Location	chr2:55593010-55593011
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:55584108..55586165-chr2:55591531..55593375,2	K562	blood:
2	chr2:55586524..55588974-chr2:55589647..55593883,3	K562	blood:
3	chr2:55589556..55591958-chr2:55592375..55594974,2	MCF-7	breast:
4	chr2:55592018..55593531-chr2:55595519..55597043,2	K562	blood:

Extended variants
information (count: 149 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:145)

rs_ID	r²[population]
rs10169395	0.89[YRI][hapmap];0.83[AFR][1000 genomes]
rs10172058	0.83[AFR][1000 genomes]
rs10189439	0.81[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10191937	0.81[AFR][1000 genomes]
rs10496042	0.88[YRI][hapmap];0.90[AFR][1000 genomes]
rs10865285	0.81[ASN][1000 genomes]
rs11125564	0.81[AFR][1000 genomes]
rs11125567	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11678347	0.84[AFR][1000 genomes]
rs11680143	0.86[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11692239	0.92[CEU][hapmap];0.90[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12470528	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12471421	0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs12476508	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12476548	0.92[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12617887	0.88[AFR][1000 genomes]
rs12621289	0.89[YRI][hapmap];0.90[AFR][1000 genomes]
rs12621495	0.85[YRI][hapmap]
rs12713292	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12713293	0.88[YRI][hapmap];0.83[AFR][1000 genomes]
rs12713294	0.83[AFR][1000 genomes]
rs12713295	0.91[YRI][hapmap];0.83[AFR][1000 genomes]
rs12713296	0.84[YRI][hapmap]
rs13001912	0.82[AFR][1000 genomes]
rs13010237	0.81[AFR][1000 genomes]
rs13013113	0.88[YRI][hapmap];0.81[AFR][1000 genomes]
rs13019339	0.81[YRI][hapmap];0.87[AFR][1000 genomes]
rs13022424	0.90[AFR][1000 genomes]
rs1344881	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1349884	0.83[AFR][1000 genomes]
rs1349885	0.82[AFR][1000 genomes]
rs1437394	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1454421	0.85[EUR][1000 genomes]
rs1545555	1.00[CEU][hapmap];0.81[CHB][hapmap];0.94[JPT][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1902059	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1902060	0.88[YRI][hapmap]
rs1982484	0.91[ASN][1000 genomes]
rs1982485	0.87[ASN][1000 genomes]
rs1992127	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1992128	0.92[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2198575	0.83[AFR][1000 genomes]
rs2198577	0.81[ASN][1000 genomes]
rs2576687	1.00[ASN][1000 genomes]
rs2576704	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2576705	0.92[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2576706	0.88[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2576707	0.83[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2576713	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576714	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576715	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576716	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2576717	0.88[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2589055	0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2589056	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2589059	0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2589065	0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2589066	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2589072	0.92[CEU][hapmap];0.91[CHB][hapmap];0.88[JPT][hapmap];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2589073	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589075	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589077	0.96[CEU][hapmap];0.94[JPT][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2589084	0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2589085	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2589086	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2589087	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589088	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2589090	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2589091	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2589102	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589103	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2589105	0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589106	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2864828	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2864829	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2864830	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2867174	0.89[YRI][hapmap]
rs2867175	0.83[AFR][1000 genomes]
rs2867177	0.83[AFR][1000 genomes]
rs2867180	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2867181	0.91[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2903508	0.88[CEU][hapmap];0.92[CHB][hapmap];0.94[JPT][hapmap];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2917776	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2917778	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2920964	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2920971	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2920974	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2966467	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3099075	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3099076	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3099077	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3099079	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3099082	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3099084	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3111410	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3111411	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3111412	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3111413	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35963448	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3762510	0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3762512	0.87[EUR][1000 genomes]
rs3791633	0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs3791634	0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs3791652	0.89[YRI][hapmap];0.90[AFR][1000 genomes]
rs3791653	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3828235	0.84[YRI][hapmap]
rs4349381	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4672039	0.88[CEU][hapmap];0.84[JPT][hapmap]
rs55711116	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55828034	0.83[ASN][1000 genomes]
rs55908714	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56133422	0.83[ASN][1000 genomes]
rs57410428	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61379198	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62137151	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62137154	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62137157	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62138071	0.81[ASN][1000 genomes]
rs6545487	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6545488	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6545493	0.88[JPT][hapmap]
rs66882175	0.81[AFR][1000 genomes]
rs6706178	0.83[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6718236	0.86[EUR][1000 genomes]
rs6724338	0.82[YRI][hapmap];0.92[AFR][1000 genomes]
rs6725124	0.91[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6727038	0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs6746104	0.86[YRI][hapmap]
rs6747649	0.88[YRI][hapmap]
rs6752182	0.82[AFR][1000 genomes]
rs6754930	0.88[AFR][1000 genomes]
rs6756777	0.85[AFR][1000 genomes]
rs74181227	0.81[AFR][1000 genomes]
rs7558687	0.82[YRI][hapmap]
rs7561473	0.87[AFR][1000 genomes]
rs7564292	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7569535	0.86[YRI][hapmap]
rs7570934	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7575929	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7576695	0.95[ASN][1000 genomes]
rs7582580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7586529	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7589390	0.88[YRI][hapmap];0.83[AFR][1000 genomes]
rs7603216	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7606505	0.80[AFR][1000 genomes]
rs9789365	0.89[YRI][hapmap];0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874156	chr2:55474026-55636351	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv874158	chr2:55513738-55619923	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv874159	chr2:55513738-55636351	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv1006170	chr2:55530179-55809251	Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs3111404	CCDC88A	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55510200-55616800	Weak transcription	Fetal Intestine Small	intestine
2	chr2:55523600-55600600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr2:55537800-55609400	Weak transcription	Lung	lung
4	chr2:55542400-55644800	Weak transcription	Primary T cells from cord blood	blood
5	chr2:55555200-55635800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr2:55558400-55595000	Weak transcription	Fetal Heart	heart
7	chr2:55564200-55605200	Weak transcription	Fetal Kidney	kidney
8	chr2:55572000-55610200	Weak transcription	Liver	Liver
9	chr2:55576000-55612200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr2:55579200-55602200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr2:55579200-55640800	Weak transcription	Fetal Brain Male	brain
12	chr2:55579400-55596200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr2:55579400-55614400	Weak transcription	Fetal Brain Female	brain
14	chr2:55579400-55622400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr2:55579400-55644400	Weak transcription	Primary B cells from cord blood	blood
16	chr2:55579600-55632200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr2:55582000-55632400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr2:55582200-55603600	Weak transcription	Ovary	ovary
19	chr2:55582800-55615000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr2:55583200-55605000	Weak transcription	HepG2	liver
21	chr2:55583400-55597400	Weak transcription	Fetal Stomach	stomach
22	chr2:55583400-55602000	Weak transcription	Left Ventricle	heart
23	chr2:55583400-55602400	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr2:55583600-55606800	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr2:55583600-55607200	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr2:55584200-55597000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr2:55584200-55612000	Weak transcription	Fetal Muscle Trunk	muscle
28	chr2:55584400-55598800	Weak transcription	Fetal Muscle Leg	muscle
29	chr2:55584600-55598000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
30	chr2:55584600-55599600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr2:55587400-55602000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr2:55589400-55639400	Weak transcription	Aorta	Aorta
33	chr2:55589600-55595000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr2:55589600-55599600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr2:55589600-55628800	Weak transcription	Fetal Thymus	thymus
36	chr2:55589600-55632200	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr2:55590200-55594600	Weak transcription	HUES48 Cell Line	embryonic stem cell
38	chr2:55590200-55599800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr2:55590400-55622400	Weak transcription	GM12878-XiMat	blood
40	chr2:55590600-55593200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr2:55590800-55593400	Enhancers	HUVEC	blood vessel
42	chr2:55590800-55593800	Enhancers	Brain Germinal Matrix	brain
43	chr2:55591000-55596800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr2:55591000-55646000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr2:55591600-55596600	Weak transcription	Dnd41	blood
46	chr2:55591600-55598000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr2:55591600-55598200	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr2:55592000-55593200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr2:55592000-55593200	Enhancers	Cortex derived primary cultured neurospheres	brain
50	chr2:55592000-55593200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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