The 2.0 version of rSNPBase

Variant report

Variant rs3123261
Chromosome Location chrX:80042777-80042778
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:80000400-80045800 Weak transcription Dnd41 blood
2 chrX:80017800-80047200 Weak transcription Primary B cells from peripheral blood blood
3 chrX:80019000-80045400 Weak transcription Primary T helper cells PMA-I stimulated --
4 chrX:80019200-80044600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chrX:80019400-80055000 Weak transcription Primary T cells from cord blood blood
6 chrX:80020000-80063000 Weak transcription Thymus Thymus
7 chrX:80020200-80063600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chrX:80020800-80062800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chrX:80021000-80062600 Weak transcription A549 lung
10 chrX:80021200-80063000 Weak transcription Osteobl bone
11 chrX:80022600-80063600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chrX:80022800-80044200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chrX:80022800-80045800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chrX:80022800-80063000 Weak transcription Fetal Intestine Small intestine
15 chrX:80023000-80046600 Weak transcription Primary T cells fromperipheralblood blood
16 chrX:80023800-80045400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chrX:80025600-80063000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chrX:80026200-80061400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chrX:80028200-80047800 Weak transcription Brain Inferior Temporal Lobe brain
20 chrX:80028600-80049600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chrX:80028600-80063000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chrX:80029000-80044000 Weak transcription HUES6 Cell Line embryonic stem cell
23 chrX:80030400-80044200 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chrX:80031400-80045400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chrX:80031800-80047800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chrX:80032400-80063000 Weak transcription Primary hematopoietic stem cells blood
27 chrX:80032400-80063000 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chrX:80032600-80062800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chrX:80033000-80044600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chrX:80033200-80046000 Weak transcription Ovary ovary
31 chrX:80034200-80062600 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chrX:80035400-80062800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chrX:80036600-80062600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chrX:80036800-80062000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chrX:80037200-80062600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chrX:80037600-80045000 Weak transcription NHDF-Ad bronchial
37 chrX:80037800-80054200 Weak transcription Fetal Thymus thymus
38 chrX:80038000-80044600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chrX:80038200-80062800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chrX:80038800-80047000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chrX:80039200-80049400 Weak transcription NH-A brain
42 chrX:80039800-80063000 Weak transcription Brain Germinal Matrix brain
43 chrX:80040000-80042800 Strong transcription Monocytes-CD14+_RO01746 blood
44 chrX:80040000-80054400 Weak transcription Fetal Stomach stomach
45 chrX:80040000-80055400 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chrX:80040000-80063000 Weak transcription Duodenum Mucosa Duodenum
47 chrX:80040200-80062800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chrX:80041400-80043600 Weak transcription Primary monocytes fromperipheralblood blood
49 chrX:80041400-80063000 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chrX:80041600-80047800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015