The 2.0 version of rSNPBase

Variant report

Variant rs3123679
Chromosome Location chr10:44110144-44110145
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:44102600-44112200 Weak transcription Placenta Amnion Placenta Amnion
2 chr10:44102800-44110200 Weak transcription H1 Cell Line embryonic stem cell
3 chr10:44102800-44110800 Weak transcription Gastric stomach
4 chr10:44102800-44110800 Weak transcription Small Intestine intestine
5 chr10:44102800-44110800 Weak transcription Stomach Mucosa stomach
6 chr10:44102800-44111000 Weak transcription Rectal Smooth Muscle rectum
7 chr10:44102800-44111200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr10:44102800-44111200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:44102800-44111400 Weak transcription Brain Hippocampus Middle brain
10 chr10:44102800-44111400 Weak transcription Colon Smooth Muscle Colon
11 chr10:44102800-44111400 Weak transcription Fetal Lung lung
12 chr10:44102800-44111600 Weak transcription Left Ventricle heart
13 chr10:44102800-44111800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr10:44102800-44111800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr10:44102800-44111800 Weak transcription Brain Germinal Matrix brain
16 chr10:44102800-44111800 Weak transcription Brain Substantia Nigra brain
17 chr10:44102800-44111800 Weak transcription Fetal Kidney kidney
18 chr10:44102800-44111800 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr10:44102800-44111800 Weak transcription Right Ventricle heart
20 chr10:44102800-44118800 Weak transcription Fetal Heart heart
21 chr10:44103000-44111200 Weak transcription Fetal Brain Female brain
22 chr10:44103000-44111400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr10:44103000-44111400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr10:44103000-44111400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr10:44103000-44111600 Weak transcription Fetal Brain Male brain
26 chr10:44103000-44111800 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr10:44103000-44111800 Weak transcription Brain Cingulate Gyrus brain
28 chr10:44103000-44111800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr10:44103000-44111800 Weak transcription Colonic Mucosa Colon
30 chr10:44103000-44112200 Weak transcription Brain Angular Gyrus brain
31 chr10:44104400-44110200 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr10:44104600-44111800 Weak transcription Pancreas Pancrea
33 chr10:44104800-44111800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr10:44105400-44111000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr10:44105600-44111200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr10:44105800-44111200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr10:44105800-44111600 Weak transcription Stomach Smooth Muscle stomach
38 chr10:44106000-44114200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr10:44106200-44113400 ZNF genes & repeats Primary hematopoietic stem cells blood
40 chr10:44106200-44113600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr10:44106400-44112400 Weak transcription Brain Anterior Caudate brain
42 chr10:44107800-44113800 ZNF genes & repeats Liver Liver
43 chr10:44108400-44110800 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr10:44108600-44111000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr10:44108600-44113000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr10:44108600-44113000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr10:44108600-44113200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr10:44108600-44113400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
49 chr10:44108800-44110400 Strong transcription Primary T cells fromperipheralblood blood
50 chr10:44108800-44110600 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015