Variant report

Variant rs329619
Chromosome Location chr5:60288707-60288708
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60254200-60288800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr5:60266200-60317400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:60273000-60288800 Weak transcription Stomach Smooth Muscle stomach
4 chr5:60274200-60288800 Weak transcription Lung lung
5 chr5:60285600-60288800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr5:60286000-60288800 Weak transcription Primary T cells fromperipheralblood blood
7 chr5:60287200-60290400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr5:60287400-60289400 ZNF genes & repeats Primary T cells from cord blood blood
9 chr5:60287600-60288800 Weak transcription Brain Hippocampus Middle brain
10 chr5:60287800-60288800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr5:60287800-60288800 Weak transcription Brain Angular Gyrus brain
12 chr5:60287800-60288800 Weak transcription Brain Anterior Caudate brain
13 chr5:60287800-60288800 Weak transcription Brain Substantia Nigra brain
14 chr5:60288200-60288800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:60288400-60289200 ZNF genes & repeats Hela-S3 cervix
16 chr5:60288600-60288800 Weak transcription Gastric stomach
17 chr5:60288600-60289200 Enhancers Skeletal Muscle Female skeletal muscle
18 chr5:60288600-60289400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
19 chr5:60288600-60289400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
20 chr5:60288600-60289400 Enhancers Adipose Nuclei Adipose
21 chr5:60288600-60289400 ZNF genes & repeats Ovary ovary
22 chr5:60288600-60289400 ZNF genes & repeats HepG2 liver
23 chr5:60288600-60289400 ZNF genes & repeats NHDF-Ad bronchial
24 chr5:60288600-60289600 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
25 chr5:60288600-60289600 ZNF genes & repeats Fetal Lung lung
26 chr5:60288600-60289800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
27 chr5:60288600-60290000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
28 chr5:60288600-60290000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr5:60288600-60290000 ZNF genes & repeats Brain Germinal Matrix brain
30 chr5:60288600-60290000 Enhancers Skeletal Muscle Male skeletal muscle
31 chr5:60288600-60290200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
32 chr5:60288600-60290200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
33 chr5:60288600-60290200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr5:60288600-60290200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr5:60288600-60290200 ZNF genes & repeats Fetal Intestine Small intestine
36 chr5:60288600-60290400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
37 chr5:60288600-60290400 Enhancers Left Ventricle heart

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