Variant report

Variant	rs34080877
Chromosome Location	chr14:65735034-65735035
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA1	chr14:65734548-65735050	PBDE	blood:	n/a	chr14:65734749-65734758 chr14:65734613-65734623 chr14:65734556-65734565 chr14:65734608-65734629

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:65687978..65690881-chr14:65733392..65735746,2	MCF-7	breast:

Variant related genes	Relation type
RPL21P7	TF binding region
ENSG00000214759	TF binding region
ENSG00000255002	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832817	chr14:65637069-65810406	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
2	nsv832818	chr14:65706859-65882320	Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
3	nsv1036403	chr14:65724229-66208114	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
4	esv1819774	chr14:65732113-65743219	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv983835	chr14:65732460-65735370	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	esv1824915	chr14:65732465-65742616	Enhancers Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv826967	chr14:65732599-65742647	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	esv1820707	chr14:65734491-65742436	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
9	esv1823970	chr14:65734491-65742436	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	esv1817283	chr14:65734510-65743411	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	nsv826968	chr14:65734640-65742879	Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
12	esv1822602	chr14:65734656-65742616	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65697200-65746800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr14:65714000-65735400	Weak transcription	Primary B cells from cord blood	blood
3	chr14:65727400-65749600	Weak transcription	Gastric	stomach
4	chr14:65731400-65735400	Weak transcription	GM12878-XiMat	blood
5	chr14:65733800-65742000	Weak transcription	Brain Substantia Nigra	brain
6	chr14:65733800-65742200	Weak transcription	Brain Anterior Caudate	brain
7	chr14:65734200-65738600	Enhancers	Stomach Mucosa	stomach
8	chr14:65734400-65736600	Enhancers	Pancreas	Pancrea
9	chr14:65734600-65735400	Enhancers	K562	blood
10	chr14:65734600-65735800	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr14:65734600-65736800	Enhancers	HepG2	liver
12	chr14:65734800-65735200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr14:65734800-65735600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr14:65735000-65735200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr14:65735000-65735800	Weak transcription	Small Intestine	intestine
16	chr14:65735000-65736200	Enhancers	Primary B cells from peripheral blood	blood
17	chr14:65735000-65736400	Weak transcription	Fetal Intestine Small	intestine
18	chr14:65735000-65736600	Enhancers	Primary T cells from cord blood	blood
19	chr14:65735000-65736800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
20	chr14:65735000-65742400	Weak transcription	Brain Hippocampus Middle	brain

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