The 2.0 version of rSNPBase

Variant report

Variant rs34084844
Chromosome Location chr1:93387592-93387593
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93367000-93390400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:93369000-93394200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:93370400-93395000 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:93370600-93395000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:93376000-93388200 Weak transcription Brain Hippocampus Middle brain
7 chr1:93376000-93395400 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:93376000-93400400 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:93376600-93388000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:93376800-93395400 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr1:93377000-93401400 Weak transcription Dnd41 blood
12 chr1:93381000-93395400 Weak transcription Thymus Thymus
13 chr1:93382200-93394800 Weak transcription Gastric stomach
14 chr1:93382600-93388000 Weak transcription Liver Liver
15 chr1:93383000-93395800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:93383400-93387600 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:93383400-93388000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:93383400-93388000 Weak transcription Osteobl bone
19 chr1:93383400-93389200 Weak transcription Fetal Lung lung
20 chr1:93383400-93395000 Weak transcription NHLF lung
21 chr1:93383400-93396800 Weak transcription Fetal Stomach stomach
22 chr1:93383600-93390600 Weak transcription HepG2 liver
23 chr1:93383600-93394600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr1:93384000-93388000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:93384600-93389800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:93384800-93399200 Weak transcription Fetal Intestine Small intestine
27 chr1:93385000-93388000 Weak transcription Rectal Smooth Muscle rectum
28 chr1:93385200-93388000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr1:93385800-93395200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:93386200-93387600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:93386200-93387800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:93386400-93387600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:93386400-93387600 Enhancers Adipose Nuclei Adipose
34 chr1:93386400-93387800 Enhancers A549 lung
35 chr1:93386800-93388800 Enhancers Brain Cingulate Gyrus brain
36 chr1:93387000-93387800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:93387000-93388000 Weak transcription Brain Angular Gyrus brain
38 chr1:93387000-93388000 Enhancers NHDF-Ad bronchial
39 chr1:93387000-93388600 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:93387200-93388000 Weak transcription Colon Smooth Muscle Colon
41 chr1:93387200-93388200 Weak transcription Stomach Smooth Muscle stomach
42 chr1:93387200-93390000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:93387200-93392000 Weak transcription Primary B cells from peripheral blood blood
44 chr1:93387200-93393600 Weak transcription Primary T cells from cord blood blood
45 chr1:93387200-93400400 Weak transcription Left Ventricle heart
46 chr1:93387400-93388000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:93387400-93388600 Enhancers Brain Anterior Caudate brain
48 chr1:93387400-93390000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:93387400-93392400 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015