The 2.0 version of rSNPBase

Variant report

Variant rs34090353
Chromosome Location chr1:92823698-92823699
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92771800-92823800 Weak transcription Colonic Mucosa Colon
3 chr1:92789800-92830600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:92792600-92846600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:92792800-92850800 Weak transcription Fetal Heart heart
6 chr1:92793800-92830200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr1:92795200-92825000 Weak transcription Aorta Aorta
8 chr1:92795200-92825000 Weak transcription Lung lung
9 chr1:92795200-92830400 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:92795200-92846600 Weak transcription Gastric stomach
11 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:92795200-92851400 Weak transcription Spleen Spleen
13 chr1:92795400-92825200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:92795600-92825200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:92795600-92826400 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr1:92795600-92831200 Weak transcription NHLF lung
17 chr1:92795800-92834800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:92797800-92830800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:92798200-92846800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:92799600-92830400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:92804200-92825800 Weak transcription HUVEC blood vessel
22 chr1:92804400-92846400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:92804400-92853200 Weak transcription NHEK skin
24 chr1:92804600-92830200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:92804600-92833200 Weak transcription NH-A brain
26 chr1:92805600-92827000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:92808200-92824600 Weak transcription HMEC breast
28 chr1:92809000-92832800 Weak transcription Thymus Thymus
29 chr1:92812400-92824600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:92812600-92835600 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:92812800-92829600 Weak transcription Right Ventricle heart
32 chr1:92814000-92823800 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr1:92814600-92834200 Weak transcription Hela-S3 cervix
34 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
35 chr1:92815400-92834400 Weak transcription Psoas Muscle Psoas
36 chr1:92815600-92826200 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:92816000-92851400 Weak transcription A549 lung
38 chr1:92816200-92825600 Weak transcription Fetal Brain Male brain
39 chr1:92816400-92846800 Weak transcription Primary monocytes fromperipheralblood blood
40 chr1:92817400-92851400 Weak transcription Rectal Smooth Muscle rectum
41 chr1:92818000-92824600 Weak transcription Duodenum Mucosa Duodenum
42 chr1:92818000-92827800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:92818000-92830400 Weak transcription GM12878-XiMat blood
44 chr1:92818000-92831000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:92818000-92837800 Weak transcription Esophagus oesophagus
46 chr1:92818000-92846200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:92818000-92846400 Weak transcription Brain Angular Gyrus brain
48 chr1:92818000-92851600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:92818000-92852600 Weak transcription Colon Smooth Muscle Colon
50 chr1:92818200-92824600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015