The 2.0 version of rSNPBase

Variant report

Variant rs34098754
Chromosome Location chr1:93431324-93431325
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93427800-93433800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:93428000-93431600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:93428000-93431800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr1:93428000-93432200 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr1:93428000-93434200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:93428200-93431400 Enhancers Primary B cells from peripheral blood blood
7 chr1:93428200-93431400 Enhancers Primary T regulatory cells fromperipheralblood blood
8 chr1:93428200-93431600 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr1:93428200-93432000 Enhancers Fetal Thymus thymus
10 chr1:93428200-93432200 Enhancers Primary T cells fromperipheralblood blood
11 chr1:93428200-93432200 Enhancers Primary T helper cells fromperipheralblood blood
12 chr1:93428200-93433600 Weak transcription Primary hematopoietic stem cells blood
13 chr1:93428200-93433600 Weak transcription Hela-S3 cervix
14 chr1:93428200-93438400 Weak transcription Brain Angular Gyrus brain
15 chr1:93428400-93433600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:93428400-93433600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:93428400-93433600 Weak transcription Brain Anterior Caudate brain
18 chr1:93428400-93433600 Weak transcription Brain Hippocampus Middle brain
19 chr1:93428400-93433600 Weak transcription Fetal Heart heart
20 chr1:93428400-93435000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:93428400-93438200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:93428400-93445800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:93428600-93431600 Enhancers Thymus Thymus
24 chr1:93428600-93436800 Weak transcription NHEK skin
25 chr1:93429000-93432200 Enhancers Primary T helper cells PMA-I stimulated --
26 chr1:93429200-93432200 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr1:93429200-93438200 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:93429400-93433600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr1:93429600-93431600 Enhancers Primary mononuclear cells fromperipheralblood Blood
30 chr1:93430000-93433400 Weak transcription GM12878-XiMat blood
31 chr1:93430200-93436600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:93430600-93432400 Enhancers Primary T cells from cord blood blood
33 chr1:93431000-93432000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr1:93431000-93433200 Weak transcription Primary B cells from cord blood blood
35 chr1:93431200-93431600 Enhancers Dnd41 blood
36 chr1:93431200-93431600 Enhancers K562 blood
37 chr1:93431200-93432200 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr1:93431200-93432200 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr1:93431200-93437800 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015