Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:71357369..71360235-chr1:71360695..71362626,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11804440	0.92[EUR][1000 genomes]
rs11805293	0.92[EUR][1000 genomes]
rs11807666	0.92[EUR][1000 genomes]
rs11808587	0.92[EUR][1000 genomes]
rs11808606	0.92[EUR][1000 genomes]
rs11809115	0.92[EUR][1000 genomes]
rs12566076	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13306022	0.92[EUR][1000 genomes]
rs2300163	1.00[AFR][1000 genomes]
rs34247575	0.92[EUR][1000 genomes]
rs34580971	0.92[EUR][1000 genomes]
rs35284022	0.92[EUR][1000 genomes]
rs35327754	0.92[EUR][1000 genomes]
rs35946140	0.92[EUR][1000 genomes]
rs35952145	0.92[EUR][1000 genomes]
rs41287914	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57313668	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58239962	0.92[EUR][1000 genomes]
rs60466683	0.92[EUR][1000 genomes]
rs60994441	1.00[EUR][1000 genomes]
rs6667891	0.92[EUR][1000 genomes]
rs6683228	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845198	chr1:71274759-71514969	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv830148	chr1:71310366-71483932	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv871604	chr1:71353104-71361673	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71358000-71361000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:71358200-71361400	Weak transcription	K562	blood
3	chr1:71359200-71361400	Weak transcription	NHDF-Ad	bronchial
4	chr1:71359200-71361600	Weak transcription	Adipose Nuclei	Adipose
5	chr1:71360800-71361000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:71360800-71362600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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