Variant report

Variant	rs34203066
Chromosome Location	chr12:11341936-11341937
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:11339360..11340873-chr12:11341423..11344007,2	K562	blood:

Variant related genes	Relation type
ENSG00000186136	Chromatin interaction

Extended variants
information (count: 22 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758294	chr12:10969620-11714921	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
2	esv2759879	chr12:10969620-11714921	Genic enhancers Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
3	nsv1038277	chr12:11060978-11504091	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
4	nsv428272	chr12:11069845-11714921	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
5	nsv1050050	chr12:11192046-11436359	Weak transcription Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	nsv1053783	chr12:11203509-11495584	Weak transcription ZNF genes & repeats Genic enhancers Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
7	esv1807067	chr12:11214215-11568895	Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
8	esv6668	chr12:11341677-11342469	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv3482907	chr12:11341765-11342319	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv3517387	chr12:11341782-11342330	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv3406239	chr12:11341790-11342312	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	esv3517389	chr12:11341815-11342259	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv3482929	chr12:11341815-11342281	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv3482896	chr12:11341821-11342285	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv3517391	chr12:11341827-11342269	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv3482918	chr12:11341835-11342239	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv3517388	chr12:11341843-11342265	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	esv3377160	chr12:11341863-11342235	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	esv3482940	chr12:11341885-11342217	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	esv3517390	chr12:11341895-11342218	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
21	esv3482952	chr12:11341899-11342216	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
22	esv3517392	chr12:11341899-11342216	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11326400-11355600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr12:11330600-11365400	Weak transcription	Primary T cells from cord blood	blood

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