Variant report

Variant	rs34306570
Chromosome Location	chr4:81463226-81463227
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10033938	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1038530	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1038531	0.81[AMR][1000 genomes]
rs11725262	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11732907	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11940084	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs12650380	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1352077	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1486015	0.80[EUR][1000 genomes]
rs1486021	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1486027	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1486030	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1601512	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1601513	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17004933	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2132264	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2867780	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2867782	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs329402	0.84[AFR][1000 genomes]
rs34975597	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs396273	0.84[AFR][1000 genomes]
rs4146323	0.85[AMR][1000 genomes]
rs4283653	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs444023	0.84[AFR][1000 genomes]
rs4693062	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4693510	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4693531	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs544526	0.84[AFR][1000 genomes]
rs59789768	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6535031	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6535040	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6535041	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72874049	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72874070	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72874077	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72874089	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72874098	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7696162	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs923178	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs971728	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81460800-81463400	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr4:81461200-81464000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr4:81461800-81465200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr4:81462800-81464000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:81463200-81463400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood

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