Variant report

Variant	rs34378536
Chromosome Location	chr14:33105237-33105238
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:33104661..33106240-chr14:33107373..33109760,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10483413	0.92[AMR][1000 genomes]
rs751688	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045035	chr14:32986003-33543227	Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv542021	chr14:32986003-33543227	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv428624	chr14:33065571-33214223	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:33096800-33105400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr14:33099200-33120400	Weak transcription	Fetal Muscle Leg	muscle
3	chr14:33101800-33107600	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr14:33102400-33105400	Enhancers	NHDF-Ad	bronchial
5	chr14:33102600-33107800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr14:33102800-33107000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr14:33103200-33106800	Weak transcription	Left Ventricle	heart
8	chr14:33103200-33107800	Enhancers	Fetal Heart	heart
9	chr14:33103200-33114600	Weak transcription	Aorta	Aorta
10	chr14:33104200-33105800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:33104200-33106200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr14:33104600-33120400	Weak transcription	HSMMtube	muscle
13	chr14:33104800-33105400	Enhancers	Brain Germinal Matrix	brain
14	chr14:33104800-33105800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr14:33104800-33106000	Weak transcription	Right Atrium	heart
16	chr14:33104800-33107000	Weak transcription	NH-A	brain
17	chr14:33104800-33107200	Weak transcription	Osteobl	bone
18	chr14:33104800-33116400	Weak transcription	Brain Substantia Nigra	brain
19	chr14:33105000-33106800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr14:33105000-33117000	Weak transcription	Brain Cingulate Gyrus	brain
21	chr14:33105000-33117200	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr14:33105200-33105600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr14:33105200-33105600	Enhancers	Liver	Liver
24	chr14:33105200-33107000	Weak transcription	Brain Anterior Caudate	brain
25	chr14:33105200-33116000	Weak transcription	Brain Hippocampus Middle	brain
26	chr14:33105200-33116400	Weak transcription	Brain Angular Gyrus	brain

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