The 2.0 version of rSNPBase

Variant report

Variant rs34389767
Chromosome Location chr1:93373780-93373781
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93364600-93375200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:93365000-93373800 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:93365800-93374600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:93366400-93373800 Weak transcription Liver Liver
5 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:93366600-93375000 Weak transcription Brain Angular Gyrus brain
7 chr1:93367000-93390400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:93367600-93375000 Weak transcription Fetal Intestine Small intestine
9 chr1:93367800-93375200 Weak transcription HSMM muscle
10 chr1:93367800-93379200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:93368000-93375800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:93368000-93375800 Weak transcription Aorta Aorta
13 chr1:93368200-93373800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:93368200-93375200 Weak transcription Brain Cingulate Gyrus brain
15 chr1:93368400-93375000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:93369000-93394200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:93370000-93374000 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:93370000-93376400 Weak transcription Dnd41 blood
19 chr1:93370200-93374000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:93370200-93378000 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:93370200-93378600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:93370400-93395000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:93370600-93395000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:93371000-93374200 Strong transcription Primary B cells from cord blood blood
25 chr1:93371000-93374800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:93371000-93376400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:93371400-93376600 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:93371600-93375600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:93371600-93376000 Strong transcription Primary T cells from cord blood blood
30 chr1:93372000-93374200 Weak transcription Primary B cells from peripheral blood blood
31 chr1:93372400-93375000 Weak transcription Psoas Muscle Psoas
32 chr1:93372600-93376400 Weak transcription GM12878-XiMat blood
33 chr1:93373000-93373800 Enhancers NHEK skin
34 chr1:93373000-93374600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:93373000-93376000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:93373000-93376600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:93373000-93376800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:93373000-93377000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:93373200-93374000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:93373200-93375400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:93373200-93376000 Enhancers NHDF-Ad bronchial
42 chr1:93373200-93376600 Enhancers HMEC breast
43 chr1:93373400-93373800 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr1:93373400-93374200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:93373400-93374600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:93373400-93375600 Enhancers Muscle Satellite Cultured Cells --
47 chr1:93373400-93375800 Enhancers NH-A brain
48 chr1:93373400-93375800 Enhancers NHLF lung
49 chr1:93373400-93376000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:93373400-93376000 Enhancers Osteobl bone

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Last update: Aug 31, 2015