Variant report

Variant rs34529833
Chromosome Location chr19:53051447-53051448
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53032200-53057000 Weak transcription Hela-S3 cervix
2 chr19:53037600-53051800 Weak transcription K562 blood
3 chr19:53039000-53052200 Weak transcription Fetal Brain Male brain
4 chr19:53039200-53056000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
5 chr19:53039600-53052000 Weak transcription HSMMtube muscle
6 chr19:53039800-53051600 Weak transcription Brain Substantia Nigra brain
7 chr19:53039800-53051600 Weak transcription Fetal Kidney kidney
8 chr19:53040000-53051600 Weak transcription Brain Angular Gyrus brain
9 chr19:53040000-53051800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr19:53040000-53052000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:53040000-53052200 Weak transcription Psoas Muscle Psoas
12 chr19:53040000-53054400 Weak transcription Fetal Heart heart
13 chr19:53040200-53051800 Weak transcription NHDF-Ad bronchial
14 chr19:53040200-53057400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr19:53040400-53057600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr19:53042000-53070400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:53042200-53051600 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr19:53042200-53068200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
19 chr19:53042400-53051600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr19:53042600-53061200 ZNF genes & repeats Liver Liver
21 chr19:53043600-53051800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr19:53044000-53056000 ZNF genes & repeats Fetal Intestine Small intestine
23 chr19:53044400-53052200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:53044400-53059000 ZNF genes & repeats GM12878-XiMat blood
25 chr19:53044600-53051800 Strong transcription Fetal Muscle Leg muscle
26 chr19:53044600-53053200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr19:53044600-53056000 ZNF genes & repeats Lung lung
28 chr19:53044600-53056400 Strong transcription Dnd41 blood
29 chr19:53044800-53061200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:53045000-53051600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:53045000-53053800 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr19:53045000-53055800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr19:53045200-53051600 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr19:53046000-53052400 Strong transcription Rectal Smooth Muscle rectum
35 chr19:53046200-53051600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:53046200-53052000 Strong transcription Fetal Thymus thymus
37 chr19:53046200-53055400 Strong transcription Muscle Satellite Cultured Cells --
38 chr19:53046200-53056800 Strong transcription Stomach Smooth Muscle stomach
39 chr19:53046200-53059800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr19:53046400-53051600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr19:53046400-53052200 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr19:53046400-53059200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr19:53046400-53069200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
44 chr19:53046600-53051600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr19:53046600-53051600 Strong transcription Adipose Nuclei Adipose
46 chr19:53046600-53058400 ZNF genes & repeats Spleen Spleen
47 chr19:53046800-53051600 Weak transcription Stomach Mucosa stomach
48 chr19:53046800-53051800 Strong transcription Placenta Placenta
49 chr19:53046800-53055200 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr19:53046800-53057200 Strong transcription Right Ventricle heart

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