Variant report

Variant	rs34625331
Chromosome Location	chr14:69897442-69897443
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs11158804	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12232173	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12589991	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12879303	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12879627	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12880219	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12883441	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12884978	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12893687	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12896978	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106973	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34218656	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34230540	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34433939	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34516562	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34621266	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34859711	0.99[ASN][1000 genomes]
rs34862239	0.95[ASN][1000 genomes]
rs34864264	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34953569	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35515794	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35532206	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35657710	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35695471	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35724400	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35828634	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs36027932	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36037391	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3784141	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61980352	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61980353	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61980354	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61982360	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61982397	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61982398	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61982401	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61982420	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61982422	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61982424	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67081339	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71423357	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7144886	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7145781	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72625682	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69868000-69923200	Weak transcription	Esophagus	oesophagus
2	chr14:69871000-69902800	Weak transcription	Psoas Muscle	Psoas
3	chr14:69885600-69899400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:69886400-69908200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr14:69887400-69913000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr14:69889200-69922400	Weak transcription	Brain Substantia Nigra	brain
7	chr14:69889200-69923400	Weak transcription	Colon Smooth Muscle	Colon
8	chr14:69889400-69923200	Weak transcription	Pancreas	Pancrea
9	chr14:69889600-69906400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr14:69890000-69922400	Weak transcription	Fetal Brain Male	brain
11	chr14:69890800-69922400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:69891200-69922800	Weak transcription	Colonic Mucosa	Colon
13	chr14:69891200-69923000	Weak transcription	NHLF	lung
14	chr14:69892000-69920600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr14:69892200-69931400	Weak transcription	K562	blood
16	chr14:69893000-69908600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr14:69893000-69919800	Weak transcription	Spleen	Spleen
18	chr14:69893000-69922800	Weak transcription	Aorta	Aorta
19	chr14:69893200-69926800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr14:69893400-69898400	Weak transcription	Pancreatic Islets	Pancreatic Islet
21	chr14:69893400-69910800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr14:69893400-69922200	Weak transcription	Left Ventricle	heart
23	chr14:69893400-69922400	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr14:69893400-69922600	Weak transcription	Brain Germinal Matrix	brain
25	chr14:69893400-69922800	Weak transcription	Rectal Smooth Muscle	rectum
26	chr14:69893400-69923000	Weak transcription	Lung	lung
27	chr14:69893600-69900000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr14:69893600-69906400	Weak transcription	Duodenum Mucosa	Duodenum
29	chr14:69893600-69908400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr14:69893600-69908600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr14:69893600-69908800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr14:69893600-69908800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr14:69893600-69920200	Weak transcription	Placenta Amnion	Placenta Amnion
34	chr14:69893600-69920400	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr14:69893600-69922000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr14:69893600-69922400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr14:69893600-69922400	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr14:69893600-69922800	Weak transcription	Brain Hippocampus Middle	brain
39	chr14:69893600-69923200	Weak transcription	Gastric	stomach
40	chr14:69893600-69925000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr14:69893800-69903200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr14:69893800-69908600	Weak transcription	Hela-S3	cervix
43	chr14:69893800-69908800	Weak transcription	HSMM	muscle
44	chr14:69894000-69906400	Weak transcription	Rectal Mucosa Donor 29	rectum
45	chr14:69894000-69906800	Weak transcription	Thymus	Thymus
46	chr14:69894000-69908600	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr14:69894000-69916000	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr14:69894000-69922200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr14:69894000-69922800	Weak transcription	Brain Cingulate Gyrus	brain
50	chr14:69894000-69924400	Weak transcription	Brain Angular Gyrus	brain

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