Variant report

Variant	rs34678475
Chromosome Location	chr14:35451103-35451104
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:182)
CpG islands
(count:0)
Chromatin interactive
region (count:15)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:182 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr14:35451100-35451250	AG04449	skin:	n/a	n/a
2	CTCF	chr14:35451080-35451230	GM12874	blood:	n/a	n/a
3	MAX	chr14:35451081-35452563	K562	blood:	n/a	chr14:35452357-35452366 chr14:35451986-35451994
4	POLR2A	chr14:35451025-35452539	GM12892	blood:	n/a	n/a
5	POLR2A	chr14:35451079-35451312	GM12878	blood:	n/a	n/a
6	POLR2A	chr14:35451015-35452569	GM12892	blood:	n/a	n/a
7	ELF1	chr14:35451032-35452552	GM12878	blood:	n/a	chr14:35452139-35452148 chr14:35452134-35452143
8	MYC	chr14:35451030-35452613	K562	blood:	n/a	chr14:35452357-35452366 chr14:35451986-35451994
9	POLR2A	chr14:35449987-35452510	HepG2	liver:	n/a	n/a
10	MXI1	chr14:35450443-35452921	GM12878	blood:	n/a	n/a
11	RAD21	chr14:35451001-35451889	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr14:35451080-35451230	MCF-7	breast:	n/a	n/a
13	RAD21	chr14:35450487-35452602	IMR90	lung:	n/a	chr14:35452231-35452245
14	ZNF143	chr14:35451001-35452390	K562	blood:	n/a	n/a
15	MAX	chr14:35450382-35452619	NB4	blood:	n/a	chr14:35452357-35452366 chr14:35451986-35451994
16	POLR2A	chr14:35450835-35453495	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr14:35451000-35451150	HA-sp	spinal cord:	n/a	n/a
18	POLR2A	chr14:35450888-35452860	GM12878	blood:	n/a	n/a
19	CTCF	chr14:35451060-35451210	AG04450	lung:	n/a	n/a
20	KAP1	chr14:35449869-35452510	HEK293	kidney:	n/a	n/a
21	CTCF	chr14:35451060-35451210	WERI-Rb-1	eye:	n/a	n/a
22	SIN3AK20	chr14:35451001-35452572	SK-N-SH	brain:	n/a	n/a
23	CTCF	chr14:35451100-35451250	HEK293	kidney:	n/a	n/a
24	TAL1	chr14:35450628-35452136	K562	blood:	n/a	n/a
25	CTCF	chr14:35451100-35451250	HPF	lung:	n/a	n/a
26	POLR2A	chr14:35449933-35452777	HepG2	liver:	n/a	n/a
27	CTCF	chr14:35451080-35451230	HPF	lung:	n/a	n/a
28	POLR2A	chr14:35451029-35452622	SK-N-MC	brain:	n/a	n/a
29	CTCF	chr14:35451100-35451250	GM12867	blood:	n/a	n/a
30	POLR2A	chr14:35451049-35452609	HL-60	blood:	n/a	n/a
31	RCOR1	chr14:35450484-35451158	K562	blood:	n/a	n/a
32	MAZ	chr14:35451026-35452623	K562	blood:	n/a	chr14:35452357-35452366 chr14:35451986-35451994
33	CHD2	chr14:35450942-35452874	GM12878	blood:	n/a	n/a
34	CTCF	chr14:35451100-35451250	HFF-Myc	foreskin:	n/a	n/a
35	CTCF	chr14:35451080-35451230	GM12878	blood:	n/a	n/a
36	POLR2A	chr14:35450030-35452656	HepG2	liver:	n/a	n/a
37	SMC3	chr14:35450388-35452338	HepG2	liver:	n/a	n/a
38	RAD21	chr14:35450499-35451206	Hela-S3	cervix:	n/a	n/a
39	SIN3AK20	chr14:35450333-35452894	HepG2	liver:	n/a	n/a
40	CTCF	chr14:35451100-35451250	AG04450	lung:	n/a	n/a
41	CTCF	chr14:35451080-35451230	HEEpiC	esophagus:	n/a	n/a
42	MYC	chr14:35450311-35452803	NB4	blood:	n/a	chr14:35452357-35452366 chr14:35451986-35451994
43	CTCF	chr14:35451100-35451250	GM12865	blood:	n/a	n/a
44	SMC3	chr14:35450953-35451273	K562	blood:	n/a	n/a
45	TCF7L2	chr14:35451046-35452624	Hela-S3	cervix:	n/a	n/a
46	CTCF	chr14:35451060-35451210	Caco-2	colon:	n/a	n/a
47	CTCF	chr14:35451100-35451250	HAc	cerebellar:	n/a	n/a
48	STAT5A	chr14:35451032-35452813	GM12878	blood:	n/a	chr14:35451973-35451993 chr14:35451979-35452002 chr14:35452052-35452063
49	HEY1	chr14:35451053-35452472	K562	blood:	n/a	n/a
50	SMC3	chr14:35450090-35452393	Hela-S3	cervix:	n/a	n/a

No data

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:35449513..35454029-chr14:35868261..35874094,7	MCF-7	breast:
2	chr14:35449656..35453109-chr14:35514529..35517063,4	MCF-7	breast:
3	chr14:35450596..35455465-chr14:35514082..35520003,7	MCF-7	breast:
4	chr14:35023701..35025768-chr14:35449276..35451419,2	K562	blood:
5	chr14:35341954..35346847-chr14:35449484..35456301,15	MCF-7	breast:
6	chr14:35450099..35453742-chr14:35513316..35517237,10	K562	blood:
7	chr14:35450376..35452323-chr14:35627573..35629639,2	K562	blood:
8	chr14:35341948..35345853-chr14:35449382..35453241,7	K562	blood:
9	chr14:35450245..35452169-chr14:35590215..35593362,3	MCF-7	breast:
10	chr14:35450146..35454994-chr14:35588530..35593322,8	MCF-7	breast:
11	chr14:35450042..35454830-chr14:35589505..35593708,8	K562	blood:
12	chr14:35341141..35345954-chr14:35450498..35453739,11	K562	blood:
13	chr14:35450019..35452754-chr14:35591061..35594828,4	K562	blood:
14	chr14:35341867..35346512-chr14:35447191..35456965,26	MCF-7	breast:
15	chr14:35449839..35454578-chr14:35513316..35515954,7	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BAZ1A-1	chr14:35449441-35452103	NONHSAT036355

No data

Variant related genes	Relation type
SRP54	TF binding region
ENSG00000151327	Chromatin interaction
ENSG00000100890	Chromatin interaction
ENSG00000198604	Chromatin interaction
ENSG00000259090	Chromatin interaction
ENSG00000206588	Chromatin interaction
ENSG00000100906	Chromatin interaction
ENSG00000258790	Chromatin interaction
ENSG00000092020	Chromatin interaction
ENSG00000258738	Chromatin interaction

Extended variants
information (count: 116 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:100)

rs_ID	r²[population]
rs1028449	0.82[ASN][1000 genomes]
rs11156867	0.92[ASN][1000 genomes]
rs11156868	0.92[ASN][1000 genomes]
rs11850317	0.92[ASN][1000 genomes]
rs12050171	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12050267	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12050390	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12050402	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12050404	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12050447	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12161905	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12587376	0.80[ASN][1000 genomes]
rs12588755	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12880809	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12880928	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12881698	0.87[ASN][1000 genomes]
rs12883971	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12886251	0.91[ASN][1000 genomes]
rs12887248	0.85[ASN][1000 genomes]
rs12887779	0.81[ASN][1000 genomes]
rs12888272	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12890056	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12890307	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12892056	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12892552	0.82[ASN][1000 genomes]
rs12893021	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12894365	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12894820	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12895051	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12895822	0.91[EUR][1000 genomes]
rs12896759	0.81[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs12897044	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17102904	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17102923	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17102967	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17102970	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1967723	0.91[ASN][1000 genomes]
rs2273156	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2273158	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2383688	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2383689	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28373355	0.91[ASN][1000 genomes]
rs34737707	0.85[ASN][1000 genomes]
rs34927714	0.80[EUR][1000 genomes]
rs35030792	0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs35090385	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35106382	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35337462	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35797365	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35830406	0.92[ASN][1000 genomes]
rs35875778	0.81[EUR][1000 genomes]
rs35962127	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36008567	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs36024417	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs36112862	0.84[AFR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs36159852	0.85[EUR][1000 genomes]
rs3809449	0.82[ASN][1000 genomes]
rs4573843	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4594164	0.82[ASN][1000 genomes]
rs5014384	0.82[ASN][1000 genomes]
rs56686328	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56950244	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs60693825	0.82[ASN][1000 genomes]
rs60803103	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61125355	0.80[ASN][1000 genomes]
rs61136372	0.80[ASN][1000 genomes]
rs62625038	0.81[ASN][1000 genomes]
rs7140843	0.92[ASN][1000 genomes]
rs71409556	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7141292	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs71421920	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs71421921	0.86[ASN][1000 genomes]
rs7143827	0.92[ASN][1000 genomes]
rs7144574	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7144617	0.87[ASN][1000 genomes]
rs7144646	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7145608	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7149177	0.80[ASN][1000 genomes]
rs7153068	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7153331	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7153550	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7153626	0.81[ASN][1000 genomes]
rs7155696	0.87[ASN][1000 genomes]
rs74046408	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs761505	0.92[ASN][1000 genomes]
rs761506	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8007274	0.82[ASN][1000 genomes]
rs8009093	0.82[ASN][1000 genomes]
rs8009646	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs8011422	0.89[ASN][1000 genomes]
rs8013540	0.82[ASN][1000 genomes]
rs8014327	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8014377	0.80[ASN][1000 genomes]
rs8015622	0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs8016566	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8017191	0.88[AFR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8017225	0.88[AFR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8018114	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8018409	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8019179	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052162	chr14:35245349-35451187	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
2	nsv1053722	chr14:35257458-35465784	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
3	nsv1045939	chr14:35311074-35494703	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
4	nsv456203	chr14:35311272-35512335	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
5	nsv564200	chr14:35311272-35512335	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
6	nsv901602	chr14:35367889-35571651	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
7	nsv949617	chr14:35379923-35825436	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
8	nsv901604	chr14:35381137-35485748	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
9	nsv1043470	chr14:35398522-35754029	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
10	nsv542031	chr14:35398522-35754029	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
11	nsv1035925	chr14:35404661-35483420	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
12	nsv901605	chr14:35409214-35512335	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
13	nsv901606	chr14:35449467-35512335	Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
14	nsv901607	chr14:35449467-35540764	Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
15	nsv901608	chr14:35449467-35571651	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
16	nsv901609	chr14:35449467-35587767	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs34678475	PPP2R3C	cis	Whole Blood	GTEx
rs34678475	PPP2R3C	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35449600-35452800	Active TSS	Rectal Mucosa Donor 29	rectum
2	chr14:35449600-35453000	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr14:35449800-35452800	Active TSS	Hela-S3	cervix
4	chr14:35449800-35453000	Active TSS	NHEK	skin
5	chr14:35449800-35453000	Active TSS	Osteobl	bone
6	chr14:35449800-35453200	Active TSS	NHDF-Ad	bronchial
7	chr14:35449800-35453400	Active TSS	GM12878-XiMat	blood
8	chr14:35449800-35453600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr14:35449800-35453600	Active TSS	NHLF	lung
10	chr14:35449800-35455400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr14:35450000-35451200	Flanking Active TSS	Primary T cells from cord blood	blood
12	chr14:35450000-35451200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
13	chr14:35450000-35451200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
14	chr14:35450000-35451200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
15	chr14:35450000-35451200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
16	chr14:35450000-35451200	Flanking Active TSS	Brain Germinal Matrix	brain
17	chr14:35450000-35451200	Flanking Active TSS	Fetal Brain Female	brain
18	chr14:35450000-35451400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
19	chr14:35450000-35451400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
20	chr14:35450000-35451400	Flanking Active TSS	Stomach Smooth Muscle	stomach
21	chr14:35450000-35451600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
22	chr14:35450000-35451600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr14:35450000-35451600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr14:35450000-35452000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
25	chr14:35450000-35452800	Active TSS	HMEC	breast
26	chr14:35450000-35453000	Active TSS	iPS-18 Cell Line	embryonic stem cell
27	chr14:35450000-35453000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr14:35450000-35453000	Active TSS	Brain Angular Gyrus	brain
29	chr14:35450000-35453000	Active TSS	Fetal Intestine Large	intestine
30	chr14:35450000-35453000	Active TSS	A549	lung
31	chr14:35450000-35453200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr14:35450000-35453200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr14:35450000-35453200	Active TSS	Pancreatic Islets	Pancreatic Islet
34	chr14:35450000-35453200	Active TSS	NH-A	brain
35	chr14:35450000-35453400	Active TSS	HUES6 Cell Line	embryonic stem cell
36	chr14:35450000-35453600	Active TSS	ES-I3 Cell Line	embryonic stem cell
37	chr14:35450000-35453600	Active TSS	iPS-20b Cell Line	embryonic stem cell
38	chr14:35450200-35451200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
39	chr14:35450200-35451200	Flanking Active TSS	Brain Hippocampus Middle	brain
40	chr14:35450200-35451400	Flanking Active TSS	Placenta	Placenta
41	chr14:35450200-35451400	Flanking Active TSS	Rectal Smooth Muscle	rectum
42	chr14:35450200-35451400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
43	chr14:35450200-35452800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr14:35450200-35453000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr14:35450200-35453000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr14:35450200-35453000	Active TSS	Brain Inferior Temporal Lobe	brain
47	chr14:35450200-35453000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr14:35450200-35453000	Active TSS	Fetal Intestine Small	intestine
49	chr14:35450200-35453000	Active TSS	Stomach Mucosa	stomach
50	chr14:35450200-35453000	Bivalent/Poised TSS	HepG2	liver

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