Variant report

Variant rs347311
Chromosome Location chr1:162303907-162303908
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:162276600-162317200 Weak transcription Pancreas Pancrea
2 chr1:162288800-162312600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:162289800-162319200 Weak transcription Duodenum Mucosa Duodenum
4 chr1:162292400-162316600 Weak transcription Fetal Intestine Large intestine
5 chr1:162292400-162316600 Weak transcription Fetal Intestine Small intestine
6 chr1:162294800-162305000 Weak transcription Brain Hippocampus Middle brain
7 chr1:162296400-162305000 Weak transcription Brain Substantia Nigra brain
8 chr1:162298600-162324600 Weak transcription Fetal Brain Female brain
9 chr1:162298800-162316200 Weak transcription Hela-S3 cervix
10 chr1:162298800-162319200 Weak transcription Fetal Kidney kidney
11 chr1:162300200-162304600 Weak transcription Primary monocytes fromperipheralblood blood
12 chr1:162300200-162319200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:162300400-162304600 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:162300400-162325000 Weak transcription Aorta Aorta
15 chr1:162301200-162317000 Weak transcription Gastric stomach
16 chr1:162301400-162336400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:162301600-162305800 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:162302200-162305000 Strong transcription Liver Liver
19 chr1:162302400-162306400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:162302400-162336800 Weak transcription Right Ventricle heart
21 chr1:162302600-162306000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:162302600-162319200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:162302800-162304000 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:162303000-162304200 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr1:162303000-162305600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:162303200-162304400 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr1:162303200-162304600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:162303400-162304000 Enhancers HUES48 Cell Line embryonic stem cell
29 chr1:162303400-162304200 Enhancers HUES6 Cell Line embryonic stem cell
30 chr1:162303400-162304600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr1:162303400-162305000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:162303600-162304200 Enhancers HUES64 Cell Line embryonic stem cell
33 chr1:162303600-162304600 Weak transcription HepG2 liver
34 chr1:162303600-162305200 Enhancers Brain Germinal Matrix brain
35 chr1:162303800-162304000 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr1:162303800-162304000 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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