The 2.0 version of rSNPBase

Variant report

Variant rs34739794
Chromosome Location chr5:60668775-60668776
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60653800-60681200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr5:60654000-60681400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr5:60657600-60676400 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr5:60658200-60674400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr5:60658800-60686600 Weak transcription Fetal Stomach stomach
6 chr5:60659000-60674600 Weak transcription Pancreas Pancrea
7 chr5:60659000-60681600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr5:60659000-60703800 Weak transcription Primary B cells from cord blood blood
9 chr5:60659200-60686600 Weak transcription Primary monocytes fromperipheralblood blood
10 chr5:60659400-60669400 Weak transcription NHDF-Ad bronchial
11 chr5:60659400-60703600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:60659600-60670800 Weak transcription Fetal Brain Male brain
13 chr5:60659600-60697600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:60660200-60681600 Weak transcription HSMM muscle
15 chr5:60661800-60686800 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr5:60662200-60686800 Weak transcription NHLF lung
17 chr5:60663200-60686800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr5:60663400-60677400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr5:60663400-60690000 Weak transcription Psoas Muscle Psoas
20 chr5:60664800-60674600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr5:60665400-60673400 Weak transcription Ovary ovary
22 chr5:60665400-60686800 Weak transcription Aorta Aorta
23 chr5:60665600-60673400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:60665600-60681600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr5:60666200-60669200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:60666800-60676800 Weak transcription Brain Substantia Nigra brain
27 chr5:60667400-60671000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:60667600-60669000 Weak transcription Left Ventricle heart
29 chr5:60667600-60670400 Weak transcription Fetal Intestine Large intestine
30 chr5:60667600-60674400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr5:60667600-60675400 Weak transcription A549 lung
32 chr5:60667600-60681600 Weak transcription Duodenum Mucosa Duodenum
33 chr5:60667800-60689800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr5:60667800-60689800 Weak transcription NHEK skin
35 chr5:60668200-60675000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr5:60668400-60674800 Weak transcription Brain Anterior Caudate brain
37 chr5:60668400-60675000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr5:60668400-60675800 Weak transcription H1 Cell Line embryonic stem cell
39 chr5:60668600-60680800 Weak transcription Brain Hippocampus Middle brain
40 chr5:60668600-60681400 Weak transcription Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015