Variant report

Variant	rs35002914
Chromosome Location	chr4:120779493-120779494
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs35033364	1.00[AFR][1000 genomes]
rs35826330	1.00[AFR][1000 genomes]
rs62321187	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532739	chr4:120392824-121098103	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:120758600-120794000	Weak transcription	Aorta	Aorta
2	chr4:120778000-120779800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr4:120778000-120780200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr4:120778200-120779600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr4:120778600-120779600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr4:120779200-120780000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr4:120779400-120780200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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