Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:126340457..126344219-chr7:126344404..126348305,6	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1008905	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10224336	0.88[AFR][1000 genomes]
rs1024417	0.91[ASN][1000 genomes]
rs1024418	0.98[ASN][1000 genomes]
rs10279616	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12667118	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13243112	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1579214	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1815973	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2237764	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2237765	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2283068	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2283069	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2299492	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2299497	0.91[ASN][1000 genomes]
rs2299498	0.91[ASN][1000 genomes]
rs2896374	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34261190	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3808152	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3808153	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3824011	0.91[ASN][1000 genomes]
rs4728048	0.91[AFR][1000 genomes]
rs4728051	0.91[ASN][1000 genomes]
rs4731321	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60676251	0.89[AFR][1000 genomes]
rs61347840	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529300	chr7:125669493-126587858	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032938	chr7:126067684-126587859	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv539119	chr7:126067684-126587859	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv889187	chr7:126219766-126478190	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
5	nsv1032108	chr7:126278349-126362592	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126342000-126367800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr7:126342600-126345200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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