The 2.0 version of rSNPBase

Variant report

Variant rs35041512
Chromosome Location chr2:180135254-180135255
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180130000-180137200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr2:180130000-180138000 Weak transcription Gastric stomach
3 chr2:180130000-180138200 Weak transcription Aorta Aorta
4 chr2:180130000-180141000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:180130000-180141200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:180130200-180136200 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:180130200-180137200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:180130200-180137200 Weak transcription NH-A brain
9 chr2:180130400-180136000 Weak transcription Brain Cingulate Gyrus brain
10 chr2:180130400-180137400 Weak transcription Fetal Intestine Large intestine
11 chr2:180130400-180138400 Weak transcription Colon Smooth Muscle Colon
12 chr2:180130400-180139200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr2:180130600-180138200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:180130800-180135400 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr2:180133400-180137200 Weak transcription NHDF-Ad bronchial
16 chr2:180133600-180135400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:180133600-180136000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:180133600-180136200 Weak transcription Brain Substantia Nigra brain
19 chr2:180133600-180138800 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr2:180133600-180138800 Weak transcription Placenta Placenta
21 chr2:180133600-180140200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:180133800-180136000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:180133800-180136200 Weak transcription Adipose Nuclei Adipose
24 chr2:180133800-180136200 Weak transcription HUVEC blood vessel
25 chr2:180133800-180136200 Weak transcription Osteobl bone
26 chr2:180133800-180137200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:180133800-180137200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:180133800-180138800 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr2:180133800-180138800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr2:180133800-180139200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr2:180133800-180141200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:180134000-180136000 Weak transcription Muscle Satellite Cultured Cells --
33 chr2:180134000-180136200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:180134000-180136200 Weak transcription A549 lung
35 chr2:180134000-180136200 Weak transcription HMEC breast
36 chr2:180134000-180136200 Weak transcription NHEK skin
37 chr2:180134000-180136600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:180134000-180139400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr2:180134000-180142200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:180134200-180137400 Weak transcription Primary monocytes fromperipheralblood blood
41 chr2:180134600-180136000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:180135000-180138200 Enhancers Brain Hippocampus Middle brain
43 chr2:180135200-180135400 Enhancers Right Atrium heart
44 chr2:180135200-180136800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:180135200-180137000 Enhancers HepG2 liver
46 chr2:180135200-180137200 Enhancers Hela-S3 cervix
47 chr2:180135200-180140400 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015