Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:21203233..21206131-chr2:21209365..21210977,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10495712	0.89[AFR][1000 genomes]
rs10495713	0.96[EUR][1000 genomes]
rs1318004	0.89[EUR][1000 genomes]
rs1318006	0.94[EUR][1000 genomes]
rs1320143	0.93[EUR][1000 genomes]
rs1320144	0.95[EUR][1000 genomes]
rs1320145	0.93[EUR][1000 genomes]
rs1344063	0.87[EUR][1000 genomes]
rs17041662	0.92[EUR][1000 genomes]
rs17041663	0.94[EUR][1000 genomes]
rs17041679	0.96[EUR][1000 genomes]
rs2337382	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34059329	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34335269	0.94[EUR][1000 genomes]
rs35893087	0.93[EUR][1000 genomes]
rs4665639	0.93[EUR][1000 genomes]
rs4665642	0.93[EUR][1000 genomes]
rs4665790	0.92[EUR][1000 genomes]
rs56213756	0.98[EUR][1000 genomes]
rs56327713	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56403064	0.98[EUR][1000 genomes]
rs62120841	0.91[EUR][1000 genomes]
rs62120842	0.86[AFR][1000 genomes]
rs62120843	0.82[AFR][1000 genomes]
rs6707950	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6721844	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6722374	0.94[EUR][1000 genomes]
rs6733447	0.96[EUR][1000 genomes]
rs7571469	0.98[EUR][1000 genomes]
rs9789416	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3442930	chr2:21205632-21205966	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21200000-21206400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr2:21200200-21207000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr2:21201200-21206400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:21203800-21206800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr2:21204800-21207000	Enhancers	Fetal Muscle Trunk	muscle
6	chr2:21205200-21206800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr2:21205400-21206000	Enhancers	Fetal Kidney	kidney
8	chr2:21205600-21208600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr2:21205800-21206200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr2:21205800-21207400	Enhancers	Fetal Muscle Leg	muscle

Quick Search: