The 2.0 version of rSNPBase

Variant report

Variant rs35224297
Chromosome Location chr5:80735726-80735727
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80697200-80739600 Weak transcription Left Ventricle heart
2 chr5:80703200-80779200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:80704400-80747600 Weak transcription Placenta Placenta
4 chr5:80707400-80748400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:80709200-80755200 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr5:80713600-80769200 Weak transcription Esophagus oesophagus
7 chr5:80716200-80767800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr5:80716800-80768400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr5:80717000-80743800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr5:80717200-80769200 Weak transcription Right Ventricle heart
11 chr5:80718000-80768800 Weak transcription Primary T cells fromperipheralblood blood
12 chr5:80718400-80752600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:80718400-80754800 Weak transcription Fetal Muscle Trunk muscle
14 chr5:80718400-80755000 Weak transcription GM12878-XiMat blood
15 chr5:80719000-80769200 Weak transcription HSMMtube muscle
16 chr5:80721600-80739800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr5:80722000-80754800 Weak transcription HSMM muscle
18 chr5:80722400-80746600 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr5:80722400-80754800 Weak transcription Stomach Smooth Muscle stomach
20 chr5:80722400-80755200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:80722400-80768800 Weak transcription Colon Smooth Muscle Colon
22 chr5:80722400-80768800 Weak transcription Fetal Brain Female brain
23 chr5:80722600-80736000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr5:80722600-80748600 Weak transcription Ovary ovary
25 chr5:80722600-80767600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr5:80722600-80768000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:80722600-80768200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:80722600-80769000 Weak transcription Brain Hippocampus Middle brain
29 chr5:80722600-80769000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr5:80722600-80769000 Weak transcription Fetal Brain Male brain
31 chr5:80722600-80769000 Weak transcription Psoas Muscle Psoas
32 chr5:80722600-80769200 Weak transcription Brain Cingulate Gyrus brain
33 chr5:80722800-80744200 Weak transcription Adipose Nuclei Adipose
34 chr5:80722800-80747800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr5:80722800-80748400 Weak transcription Fetal Lung lung
36 chr5:80722800-80755200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr5:80724000-80748400 Weak transcription Fetal Muscle Leg muscle
38 chr5:80725200-80748000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr5:80725400-80755200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr5:80726800-80737800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:80729400-80737600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr5:80729400-80738200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:80729400-80738600 Strong transcription Fetal Thymus thymus
44 chr5:80729600-80769200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr5:80729800-80769200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr5:80730600-80735800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr5:80730600-80767800 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr5:80731400-80737000 Weak transcription Primary T cells from cord blood blood
49 chr5:80731400-80740200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr5:80731400-80749000 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015