Variant report

Variant	rs352250
Chromosome Location	chr13:70034591-70034592
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1157364	1.00[ASN][1000 genomes]
rs1330533	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497365	0.91[CHB][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2991962	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs352255	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs563789	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7329218	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9634955	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:70031600-70035400	Weak transcription	Fetal Brain Male	brain
2	chr13:70031600-70037000	Enhancers	Brain Germinal Matrix	brain
3	chr13:70032000-70035400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr13:70032000-70035400	Weak transcription	Fetal Lung	lung
5	chr13:70032800-70036200	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr13:70033000-70036400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr13:70033800-70034800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr13:70034000-70035400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr13:70034000-70035400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr13:70034200-70035200	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr13:70034200-70035400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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