Variant report

Variant	rs35236754
Chromosome Location	chr3:34515113-34515114
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12632962	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1358616	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1518885	0.82[ASN][1000 genomes]
rs1529075	0.82[ASN][1000 genomes]
rs2167040	0.86[ASN][1000 genomes]
rs2218729	0.85[ASN][1000 genomes]
rs35289126	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35488362	0.82[ASN][1000 genomes]
rs35905703	0.86[ASN][1000 genomes]
rs4533591	0.81[ASN][1000 genomes]
rs67251788	0.84[ASN][1000 genomes]
rs6804250	0.87[ASN][1000 genomes]
rs73058737	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9816663	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876683	chr3:34451940-34536095	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1007906	chr3:34466966-34607465	ZNF genes & repeats Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3333833	chr3:34480997-34525040	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv876684	chr3:34502652-34566947	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34513600-34517200	Weak transcription	Thymus	Thymus
2	chr3:34515000-34515200	Weak transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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