The 2.0 version of rSNPBase

Variant report

Variant rs35322308
Chromosome Location chr1:220804451-220804452
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220752600-220808600 Weak transcription Left Ventricle heart
2 chr1:220767800-220826400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:220768000-220804600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr1:220768000-220813800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:220778800-220837200 Weak transcription NHEK skin
6 chr1:220782800-220825800 Weak transcription Fetal Brain Male brain
7 chr1:220783200-220815000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:220784200-220836600 Weak transcription Fetal Lung lung
9 chr1:220784800-220815000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:220785000-220815400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:220785800-220808600 Weak transcription Brain Anterior Caudate brain
12 chr1:220791200-220828600 Weak transcription Right Ventricle heart
13 chr1:220791200-220841200 Weak transcription HMEC breast
14 chr1:220792000-220834200 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:220796200-220827800 Weak transcription Gastric stomach
16 chr1:220798000-220836400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:220798800-220826200 Weak transcription Brain Angular Gyrus brain
18 chr1:220799600-220827000 Weak transcription Stomach Smooth Muscle stomach
19 chr1:220799800-220814600 Weak transcription Aorta Aorta
20 chr1:220800000-220806200 Weak transcription Adipose Nuclei Adipose
21 chr1:220800000-220808800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:220800000-220814800 Weak transcription Fetal Muscle Leg muscle
23 chr1:220800000-220837800 Weak transcription Esophagus oesophagus
24 chr1:220800200-220808600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:220800200-220814600 Weak transcription Fetal Stomach stomach
26 chr1:220800400-220804800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:220800400-220806000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:220800400-220811800 Weak transcription Fetal Muscle Trunk muscle
29 chr1:220800600-220805800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:220800600-220808800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:220800800-220826400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:220801000-220808600 Weak transcription Brain Germinal Matrix brain
33 chr1:220801400-220809800 Weak transcription Fetal Brain Female brain
34 chr1:220801800-220807000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:220801800-220808400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:220801800-220815200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:220802000-220805400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr1:220802200-220814600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:220802400-220826400 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:220803400-220805200 Enhancers HUES48 Cell Line embryonic stem cell
41 chr1:220803400-220808800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:220803600-220805200 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr1:220803600-220805400 Enhancers HUES64 Cell Line embryonic stem cell
44 chr1:220804200-220805200 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:220804200-220805200 Enhancers ES-WA7 Cell Line embryonic stem cell
46 chr1:220804400-220804600 Enhancers HUES6 Cell Line embryonic stem cell
47 chr1:220804400-220805000 Enhancers H1 Cell Line embryonic stem cell
48 chr1:220804400-220805000 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr1:220804400-220805200 Enhancers Hela-S3 cervix
50 chr1:220804400-220807400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015