Variant report

Variant	rs35338373
Chromosome Location	chr7:104816154-104816155
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs35696130	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34588	chr7:104737612-105153242	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	esv2757233	chr7:104758250-105208492	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	esv2759549	chr7:104758250-105208492	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
4	nsv8196	chr7:104763559-105155978	Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	esv34580	chr7:104763580-105153242	Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
6	esv2758127	chr7:104766707-105110581	Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
7	nsv1028228	chr7:104807207-105182998	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104753800-104822000	Weak transcription	Small Intestine	intestine
2	chr7:104754400-104850400	Weak transcription	Fetal Kidney	kidney
3	chr7:104780000-104818800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr7:104780200-104818800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr7:104782800-104845600	Weak transcription	Spleen	Spleen
6	chr7:104784400-104818800	Weak transcription	Colon Smooth Muscle	Colon
7	chr7:104805000-104818600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr7:104806400-104819000	Weak transcription	Lung	lung
9	chr7:104806400-104838200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr7:104806600-104836800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr7:104806600-104842000	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr7:104807600-104829800	Weak transcription	Thymus	Thymus
13	chr7:104807800-104816400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr7:104807800-104818800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr7:104807800-104819800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr7:104808000-104819600	Weak transcription	NHEK	skin
17	chr7:104808000-104820600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr7:104808400-104820600	Weak transcription	Primary hematopoietic stem cells	blood
19	chr7:104808800-104819000	Weak transcription	HepG2	liver
20	chr7:104808800-104822800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr7:104809000-104819000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr7:104809000-104820400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr7:104809000-104836600	Weak transcription	HSMM	muscle
24	chr7:104809000-104838800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr7:104809200-104819000	Weak transcription	Adipose Nuclei	Adipose
26	chr7:104809200-104819800	Weak transcription	Primary T cells from cord blood	blood
27	chr7:104809200-104821800	Weak transcription	A549	lung
28	chr7:104809200-104825600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr7:104809200-104825800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr7:104809400-104821600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr7:104809600-104818600	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr7:104809600-104818600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr7:104809600-104818800	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr7:104809600-104818800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr7:104809600-104825800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:104809600-104838000	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr7:104809800-104820400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr7:104809800-104826600	Weak transcription	Primary B cells from cord blood	blood
39	chr7:104809800-104838000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr7:104810000-104818800	Weak transcription	Liver	Liver
41	chr7:104810200-104840600	Weak transcription	Primary T helper cells fromperipheralblood	blood
42	chr7:104814000-104819000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr7:104814000-104839800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr7:104814200-104819000	Weak transcription	Brain Angular Gyrus	brain
45	chr7:104814200-104819000	Weak transcription	Ovary	ovary
46	chr7:104814200-104820000	Weak transcription	Psoas Muscle	Psoas
47	chr7:104814200-104821800	Weak transcription	Gastric	stomach
48	chr7:104814200-104827000	Weak transcription	Pancreas	Pancrea
49	chr7:104814400-104816600	Weak transcription	Brain Hippocampus Middle	brain
50	chr7:104814400-104817200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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