The 2.0 version of rSNPBase

Variant report

Variant rs35367625
Chromosome Location chr1:93399705-93399706
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93376000-93400400 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:93377000-93401400 Weak transcription Dnd41 blood
4 chr1:93387200-93400400 Weak transcription Left Ventricle heart
5 chr1:93388200-93408800 Weak transcription Pancreas Pancrea
6 chr1:93390400-93402200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:93391200-93408800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:93392000-93401200 Enhancers Primary B cells from peripheral blood blood
9 chr1:93395000-93407200 Weak transcription Small Intestine intestine
10 chr1:93395200-93400200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:93395200-93401000 Enhancers Primary B cells from cord blood blood
12 chr1:93395400-93408800 Weak transcription Stomach Mucosa stomach
13 chr1:93395600-93400000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:93395600-93400000 Weak transcription NH-A brain
15 chr1:93395600-93400400 Weak transcription Fetal Thymus thymus
16 chr1:93395800-93400000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:93395800-93400200 Weak transcription Aorta Aorta
18 chr1:93395800-93400200 Weak transcription Psoas Muscle Psoas
19 chr1:93395800-93400400 Weak transcription Gastric stomach
20 chr1:93395800-93400600 Weak transcription Thymus Thymus
21 chr1:93395800-93405200 Weak transcription Ovary ovary
22 chr1:93395800-93408800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:93396200-93400200 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:93396600-93400000 Weak transcription Primary T cells from cord blood blood
25 chr1:93396800-93400800 Enhancers Placenta Placenta
26 chr1:93397200-93400400 Weak transcription Fetal Stomach stomach
27 chr1:93398200-93400800 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr1:93398200-93401600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:93398200-93403600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr1:93398400-93400600 Flanking Active TSS GM12878-XiMat blood
31 chr1:93398400-93400800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:93398400-93401000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:93398400-93401400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:93398400-93401800 Enhancers NHEK skin
35 chr1:93398800-93400000 Enhancers Osteobl bone
36 chr1:93398800-93400800 Enhancers Fetal Lung lung
37 chr1:93398800-93402600 Enhancers NHLF lung
38 chr1:93398800-93403600 Enhancers NHDF-Ad bronchial
39 chr1:93399000-93400000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:93399000-93400200 Enhancers Brain Anterior Caudate brain
41 chr1:93399000-93400200 Enhancers Brain Substantia Nigra brain
42 chr1:93399000-93400200 Enhancers Duodenum Smooth Muscle Duodenum
43 chr1:93399000-93400400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:93399000-93400400 Enhancers Liver Liver
45 chr1:93399000-93400600 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr1:93399000-93400800 Enhancers Brain Cingulate Gyrus brain
47 chr1:93399000-93401200 Enhancers HMEC breast
48 chr1:93399000-93401600 Enhancers Rectal Smooth Muscle rectum
49 chr1:93399000-93403600 Enhancers Brain Hippocampus Middle brain
50 chr1:93399200-93399800 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015