The 2.0 version of rSNPBase

Variant report

Variant rs35374730
Chromosome Location chr1:155855476-155855477
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155830000-155869000 Weak transcription Gastric stomach
2 chr1:155830400-155865800 Weak transcription Esophagus oesophagus
3 chr1:155830600-155866800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:155831000-155862600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr1:155831000-155862800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:155831000-155863000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:155831200-155862800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:155831400-155859000 Weak transcription HUVEC blood vessel
9 chr1:155836400-155866400 Weak transcription Primary B cells from cord blood blood
10 chr1:155837600-155863000 Weak transcription Colonic Mucosa Colon
11 chr1:155841400-155863000 Weak transcription Primary monocytes fromperipheralblood blood
12 chr1:155841800-155869200 Weak transcription Right Ventricle heart
13 chr1:155842600-155863400 Weak transcription Right Atrium heart
14 chr1:155844000-155862200 Weak transcription Lung lung
15 chr1:155844400-155874000 Weak transcription Fetal Brain Male brain
16 chr1:155847000-155860200 Strong transcription Fetal Brain Female brain
17 chr1:155847200-155860200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:155847400-155860400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:155847600-155857000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:155847600-155866400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:155849000-155858000 Strong transcription Brain Germinal Matrix brain
22 chr1:155849400-155863000 Weak transcription Rectal Smooth Muscle rectum
23 chr1:155849600-155862800 Weak transcription Primary hematopoietic stem cells blood
24 chr1:155850000-155862800 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:155850400-155862400 Weak transcription Placenta Placenta
26 chr1:155850600-155856000 Enhancers Fetal Intestine Large intestine
27 chr1:155850600-155873600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:155851400-155855800 Enhancers Fetal Intestine Small intestine
29 chr1:155851400-155859800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:155851400-155862600 Weak transcription Adipose Nuclei Adipose
31 chr1:155851400-155862600 Weak transcription Stomach Smooth Muscle stomach
32 chr1:155851400-155862800 Weak transcription Colon Smooth Muscle Colon
33 chr1:155851400-155863200 Weak transcription Aorta Aorta
34 chr1:155851400-155866000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:155851400-155866000 Weak transcription Spleen Spleen
36 chr1:155851400-155866400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:155851400-155867400 Weak transcription H1 Cell Line embryonic stem cell
38 chr1:155851600-155859400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:155851600-155866800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:155851600-155870200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:155852600-155862800 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr1:155852600-155863000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:155852800-155857400 Strong transcription Fetal Stomach stomach
44 chr1:155853000-155863400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:155853200-155862200 Weak transcription Fetal Muscle Trunk muscle
46 chr1:155853200-155863000 Weak transcription Left Ventricle heart
47 chr1:155853400-155855800 Genic enhancers Brain Angular Gyrus brain
48 chr1:155853400-155855800 Genic enhancers Brain Hippocampus Middle brain
49 chr1:155853600-155862800 Weak transcription Primary T cells fromperipheralblood blood
50 chr1:155854200-155857000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015