The 2.0 version of rSNPBase

Variant report

Variant rs35413012
Chromosome Location chr13:50939608-50939609
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50932000-50940800 Weak transcription Small Intestine intestine
2 chr13:50933400-50939800 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr13:50933400-50944600 Weak transcription Fetal Lung lung
4 chr13:50933800-50944000 Weak transcription Primary B cells from cord blood blood
5 chr13:50934600-50942000 Weak transcription H9 Cell Line embryonic stem cell
6 chr13:50937000-50940800 Weak transcription Fetal Heart heart
7 chr13:50938200-50939800 Enhancers Liver Liver
8 chr13:50938800-50939800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr13:50939000-50939800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr13:50939000-50939800 Enhancers Aorta Aorta
11 chr13:50939200-50939800 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr13:50939200-50939800 Enhancers HUVEC blood vessel
13 chr13:50939200-50940000 Enhancers Pancreatic Islets Pancreatic Islet
14 chr13:50939200-50941400 Enhancers Stomach Mucosa stomach
15 chr13:50939400-50939800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr13:50939400-50939800 Enhancers Gastric stomach
17 chr13:50939400-50940000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
18 chr13:50939400-50940000 Enhancers Pancreas Pancrea
19 chr13:50939400-50940000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr13:50939400-50940600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr13:50939400-50940600 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr13:50939400-50940600 Enhancers Fetal Thymus thymus
23 chr13:50939400-50940800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr13:50939400-50940800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
25 chr13:50939400-50941200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr13:50939400-50941400 Enhancers Primary B cells from peripheral blood blood
27 chr13:50939400-50942000 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr13:50939600-50939800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
29 chr13:50939600-50939800 Enhancers Fetal Kidney kidney
30 chr13:50939600-50939800 Enhancers A549 lung
31 chr13:50939600-50940000 Enhancers Duodenum Mucosa Duodenum
32 chr13:50939600-50940000 Enhancers Esophagus oesophagus
33 chr13:50939600-50940000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr13:50939600-50940000 Enhancers Osteobl bone
35 chr13:50939600-50940200 Flanking Active TSS HepG2 liver
36 chr13:50939600-50940400 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr13:50939600-50940800 Flanking Active TSS GM12878-XiMat blood
38 chr13:50939600-50941000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
39 chr13:50939600-50941000 Enhancers Brain Germinal Matrix brain
40 chr13:50939600-50941200 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015