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Variant report
Variant
rs35415182
Chromosome Location
chr1:210384889-210384890
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr1:210382606..210385397-chr1:210405374..210407768,2
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000203706
Chromatin interaction
ENSG00000082497
Chromatin interaction
Extended variants information (count: 4 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:2)
rs_ID
r
2
[population]
rs73063760
1.00[AMR][1000 genomes]
rs9970953
0.84[AFR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv1014034
chr1:209759648-210501731
Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
45 gene(s)
inside rSNPs
diseases
2
nsv526050
chr1:210381257-210386585
Active TSS Enhancers Flanking Active TSS
Chromatin interactive region
3 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links