The 2.0 version of rSNPBase

Variant report

Variant rs35489312
Chromosome Location chr17:43517252-43517253
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43509800-43523600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr17:43510000-43517800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:43510000-43523000 Weak transcription HSMM muscle
4 chr17:43510000-43523200 Weak transcription NHDF-Ad bronchial
5 chr17:43510200-43548200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr17:43510400-43539200 Weak transcription Osteobl bone
7 chr17:43510600-43523600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr17:43510800-43522800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr17:43510800-43530000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:43511000-43517600 Weak transcription HUVEC blood vessel
12 chr17:43511200-43517600 Strong transcription Fetal Intestine Small intestine
13 chr17:43511400-43518000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr17:43511600-43517800 Strong transcription Brain Cingulate Gyrus brain
15 chr17:43511800-43517600 Strong transcription Fetal Stomach stomach
16 chr17:43512200-43517800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr17:43512400-43517400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr17:43512400-43517400 Strong transcription Adipose Nuclei Adipose
19 chr17:43512400-43517400 Genic enhancers Fetal Thymus thymus
20 chr17:43512400-43518000 Strong transcription Spleen Spleen
21 chr17:43512400-43519800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr17:43512400-43524200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr17:43512600-43518200 Strong transcription Brain Hippocampus Middle brain
24 chr17:43512600-43523600 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr17:43512600-43525200 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr17:43512800-43517400 Strong transcription Stomach Smooth Muscle stomach
27 chr17:43512800-43517600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr17:43512800-43518400 Strong transcription Brain Inferior Temporal Lobe brain
29 chr17:43512800-43519400 Strong transcription NHLF lung
30 chr17:43513000-43517400 Strong transcription Primary B cells from peripheral blood blood
31 chr17:43513000-43517400 Strong transcription Dnd41 blood
32 chr17:43513000-43517600 Strong transcription Fetal Brain Female brain
33 chr17:43513000-43518200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr17:43513000-43519600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr17:43513200-43517600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
36 chr17:43513200-43517800 Strong transcription Primary T cells fromperipheralblood blood
37 chr17:43513200-43517800 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr17:43513200-43518000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr17:43513200-43518000 Strong transcription Right Ventricle heart
40 chr17:43513200-43518200 Strong transcription Brain Substantia Nigra brain
41 chr17:43513400-43517400 Strong transcription Thymus Thymus
42 chr17:43513400-43517800 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr17:43513400-43518000 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr17:43513400-43518200 Strong transcription Primary T cells from cord blood blood
45 chr17:43513600-43517400 Strong transcription Duodenum Mucosa Duodenum
46 chr17:43513600-43517600 Strong transcription Brain Angular Gyrus brain
47 chr17:43513600-43518400 Strong transcription Aorta Aorta
48 chr17:43513600-43518800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr17:43513800-43528200 Weak transcription Fetal Brain Male brain
50 chr17:43514000-43517600 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015