Variant report

Variant rs35617453
Chromosome Location chr15:56209447-56209448
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56176000-56216200 Weak transcription Fetal Intestine Small intestine
2 chr15:56188600-56218400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr15:56190000-56220000 Weak transcription Pancreas Pancrea
4 chr15:56190200-56221200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr15:56190400-56219800 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr15:56200200-56213200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr15:56200800-56218000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr15:56201000-56230000 Weak transcription Fetal Intestine Large intestine
9 chr15:56201200-56217200 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr15:56203600-56209600 Active TSS Skeletal Muscle Female skeletal muscle
11 chr15:56204600-56209800 Active TSS Skeletal Muscle Male skeletal muscle
12 chr15:56204800-56210400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr15:56206800-56217800 Weak transcription Duodenum Mucosa Duodenum
14 chr15:56207400-56209600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr15:56207400-56209600 Active TSS Psoas Muscle Psoas
16 chr15:56207400-56210000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr15:56207400-56210400 Weak transcription Dnd41 blood
18 chr15:56207600-56210000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr15:56207600-56210200 Flanking Active TSS Osteobl bone
20 chr15:56207600-56221200 Weak transcription Right Ventricle heart
21 chr15:56207800-56210600 Enhancers HMEC breast
22 chr15:56208000-56209600 Active TSS Duodenum Smooth Muscle Duodenum
23 chr15:56208200-56210400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr15:56208400-56210000 Flanking Active TSS NH-A brain
25 chr15:56208600-56209600 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr15:56208600-56210400 Enhancers Rectal Smooth Muscle rectum
27 chr15:56208600-56218000 Weak transcription Esophagus oesophagus
28 chr15:56208800-56209600 Flanking Active TSS NHEK skin
29 chr15:56208800-56221600 Weak transcription Primary hematopoietic stem cells blood
30 chr15:56208800-56230000 Weak transcription Liver Liver
31 chr15:56209000-56209800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr15:56209000-56210000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr15:56209000-56210200 Flanking Active TSS A549 lung
34 chr15:56209000-56218400 Weak transcription Fetal Stomach stomach
35 chr15:56209000-56230400 Weak transcription Primary T cells from cord blood blood
36 chr15:56209200-56210600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr15:56209200-56221200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr15:56209200-56221600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr15:56209200-56230200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr15:56209200-56230200 Weak transcription Aorta Aorta
41 chr15:56209400-56209600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr15:56209400-56209600 Enhancers Stomach Smooth Muscle stomach
43 chr15:56209400-56209600 Flanking Active TSS NHLF lung
44 chr15:56209400-56209800 Flanking Active TSS Muscle Satellite Cultured Cells --
45 chr15:56209400-56210000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr15:56209400-56210200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr15:56209400-56210200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr15:56209400-56210200 Enhancers HSMMtube muscle
49 chr15:56209400-56210400 Enhancers HSMM muscle
50 chr15:56209400-56210800 Enhancers HUVEC blood vessel

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