Variant report

Variant	rs35665370
Chromosome Location	chr18:44810014-44810015
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:158)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:158 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr18:44809831-44810304	HCT-116	colon:	n/a	n/a
2	UBTF	chr18:44809921-44810113	K562	blood:	n/a	n/a
3	CTCF	chr18:44809960-44810110	HCT-116	colon:	n/a	n/a
4	CTCF	chr18:44810000-44810150	HBMEC	blood vessel:	n/a	n/a
5	CTCF	chr18:44809949-44810240	A549	lung:	n/a	n/a
6	RAD21	chr18:44809905-44810200	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTCF	chr18:44809976-44810128	GM10266	blood:	n/a	n/a
8	RAD21	chr18:44809838-44810277	H1-hESC	embryonic stem cell:	n/a	n/a
9	ZNF143	chr18:44809905-44810179	H1-hESC	embryonic stem cell:	n/a	n/a
10	RAD21	chr18:44809944-44810242	HepG2	liver:	n/a	n/a
11	CTCF	chr18:44809980-44810130	HRE	kidney:	n/a	n/a
12	CTCF	chr18:44809980-44810130	WERI-Rb-1	eye:	n/a	n/a
13	CTCF	chr18:44809991-44810142	NHEK	skin:	n/a	n/a
14	CTCF	chr18:44809960-44810110	GM12870	blood:	n/a	n/a
15	CTCF	chr18:44809960-44810110	GM12871	blood:	n/a	n/a
16	CTCF	chr18:44809947-44810172	GM12878	blood:	n/a	n/a
17	CTCF	chr18:44810008-44810170	GM19238	blood:	n/a	n/a
18	CTCF	chr18:44809936-44810179	K562	blood:	n/a	n/a
19	SMC3	chr18:44809871-44810239	HepG2	liver:	n/a	n/a
20	CTCF	chr18:44809980-44810130	K562	blood:	n/a	n/a
21	CTCF	chr18:44809790-44810271	HepG2	liver:	n/a	n/a
22	RAD21	chr18:44809867-44810300	MCF-7	breast:	n/a	n/a
23	CTCF	chr18:44809994-44810160	GM13977	blood:	n/a	n/a
24	RAD21	chr18:44809883-44810239	SK-N-SH_RA	brain:	n/a	n/a
25	CTCF	chr18:44809702-44810499	A549	lung:	n/a	n/a
26	CTCF	chr18:44809939-44810190	Medullo	brain:	n/a	n/a
27	CTCF	chr18:44809940-44810090	GM12870	blood:	n/a	n/a
28	CTCF	chr18:44809980-44810130	AG09319	gingival:	n/a	n/a
29	CTCF	chr18:44810007-44810162	GM19240	blood:	n/a	n/a
30	CTCF	chr18:44810000-44810150	HCM	heart:	n/a	n/a
31	SMC3	chr18:44809861-44810293	Hela-S3	cervix:	n/a	n/a
32	CTCF	chr18:44809980-44810130	HCM	heart:	n/a	n/a
33	CTCF	chr18:44809940-44810090	GM06990	blood:	n/a	n/a
34	CTCF	chr18:44809980-44810130	NHLF	lung:	n/a	n/a
35	CTCF	chr18:44809940-44810090	GM12866	blood:	n/a	n/a
36	MAX	chr18:44809941-44810199	NB4	blood:	n/a	n/a
37	CTCF	chr18:44809871-44810296	MCF-7	breast:	n/a	n/a
38	CTCF	chr18:44809920-44810070	BE2_C	brain:	n/a	n/a
39	CTCF	chr18:44809940-44810090	HPF	lung:	n/a	n/a
40	RAD21	chr18:44809888-44810259	IMR90	lung:	n/a	n/a
41	CTCF	chr18:44809892-44810256	GM12878	blood:	n/a	n/a
42	CTCF	chr18:44809940-44810090	AG04450	lung:	n/a	n/a
43	CTCF	chr18:44809940-44810090	HMEC	breast:	n/a	n/a
44	RFX5	chr18:44809873-44810206	Hela-S3	cervix:	n/a	n/a
45	CTCF	chr18:44809980-44810130	AG04449	skin:	n/a	n/a
46	RAD21	chr18:44809843-44810250	HepG2	liver:	n/a	n/a
47	CTCF	chr18:44809980-44810130	GM12878	blood:	n/a	n/a
48	CTCF	chr18:44809980-44810130	GM12868	blood:	n/a	n/a
49	CTCF	chr18:44809975-44810127	SK-N-SH_RA	brain:	n/a	n/a
50	CTCF	chr18:44810000-44810150	GM12873	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr18:44626315..44627260-chr18:44809604..44810507,2	K562	blood:
2	chr18:44741605..44742518-chr18:44809606..44810656,4	MCF-7	breast:
3	chr18:44576733..44577369-chr18:44809595..44810437,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000267761	TF binding region

rs_ID	r²[population]
rs2684830	1.00[AFR][1000 genomes]
rs2850693	1.00[AFR][1000 genomes]
rs71352656	1.00[AMR][1000 genomes]

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44808200-44810400	Strong transcription	Muscle Satellite Cultured Cells	--

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