The 2.0 version of rSNPBase

Variant report

Variant rs35715673
Chromosome Location chr1:172868751-172868752
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172864800-172870000 Enhancers HUVEC blood vessel
2 chr1:172865000-172871200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:172865200-172868800 Weak transcription Primary B cells from cord blood blood
4 chr1:172865200-172870400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:172865200-172870400 Weak transcription HSMMtube muscle
6 chr1:172865200-172871400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr1:172865200-172872200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:172865200-172872200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:172865200-172875200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:172865400-172869600 Weak transcription Dnd41 blood
11 chr1:172865600-172869400 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:172865600-172869600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:172865600-172869600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:172865600-172869600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:172865600-172874600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:172865800-172875200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:172865800-172878400 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:172866600-172868800 Enhancers Osteobl bone
19 chr1:172867000-172868800 Enhancers NH-A brain
20 chr1:172867200-172871600 Weak transcription NHEK skin
21 chr1:172867200-172872200 Weak transcription HMEC breast
22 chr1:172867400-172868800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:172867400-172871400 Weak transcription Hela-S3 cervix
24 chr1:172867800-172871400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:172868000-172869600 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr1:172868000-172870400 Enhancers Primary T cells from cord blood blood
27 chr1:172868200-172869600 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:172868200-172870400 Enhancers Primary T helper cells PMA-I stimulated --
29 chr1:172868400-172868800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:172868400-172869600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:172868400-172870800 Enhancers Primary hematopoietic stem cells blood
32 chr1:172868400-172871000 Weak transcription HSMM muscle
33 chr1:172868400-172871200 Weak transcription NHDF-Ad bronchial
34 chr1:172868600-172868800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:172868600-172869600 Weak transcription NHLF lung
36 chr1:172868600-172870800 Enhancers Primary B cells from peripheral blood blood
37 chr1:172868600-172871400 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:172868600-172872000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:172868600-172872200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:172868600-172872600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015