The 2.0 version of rSNPBase

Variant report

Variant rs35746980
Chromosome Location chr12:11314022-11314023
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11262200-11314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr12:11262800-11318200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr12:11270400-11323200 Weak transcription Fetal Kidney kidney
4 chr12:11273800-11321800 Weak transcription Osteobl bone
5 chr12:11282400-11318200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr12:11286600-11318600 Weak transcription Ovary ovary
7 chr12:11291600-11321800 Weak transcription Muscle Satellite Cultured Cells --
8 chr12:11295800-11318400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr12:11297400-11318400 Weak transcription Thymus Thymus
10 chr12:11297600-11315200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr12:11297800-11318400 Weak transcription Aorta Aorta
12 chr12:11297800-11318400 Weak transcription Lung lung
13 chr12:11297800-11321600 Weak transcription Brain Angular Gyrus brain
14 chr12:11301000-11318200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr12:11301600-11316600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr12:11301600-11318200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr12:11301600-11323200 Weak transcription Colonic Mucosa Colon
18 chr12:11302000-11317800 Weak transcription Duodenum Mucosa Duodenum
19 chr12:11302000-11321200 Weak transcription Rectal Smooth Muscle rectum
20 chr12:11302200-11318400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr12:11302600-11323200 Weak transcription Placenta Amnion Placenta Amnion
22 chr12:11303800-11318200 Weak transcription Placenta Placenta
23 chr12:11303800-11318400 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr12:11303800-11323600 Weak transcription Esophagus oesophagus
25 chr12:11304000-11316600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr12:11304000-11318400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr12:11304000-11318400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr12:11304000-11321200 Weak transcription Fetal Brain Male brain
29 chr12:11304000-11322600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr12:11304000-11323200 Weak transcription H9 Cell Line embryonic stem cell
31 chr12:11304000-11323200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr12:11304000-11323600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr12:11304200-11317800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr12:11304200-11318200 Weak transcription Primary T cells fromperipheralblood blood
35 chr12:11304200-11318400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr12:11304200-11319800 Weak transcription Liver Liver
37 chr12:11304200-11322000 Weak transcription Colon Smooth Muscle Colon
38 chr12:11306200-11314800 Weak transcription Right Atrium heart
39 chr12:11306400-11321400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr12:11307200-11317000 Weak transcription Brain Germinal Matrix brain
41 chr12:11307400-11321400 Weak transcription HMEC breast
42 chr12:11309000-11314800 Weak transcription Brain Cingulate Gyrus brain
43 chr12:11309200-11314200 Weak transcription Primary B cells from peripheral blood blood
44 chr12:11309200-11317400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr12:11309200-11321800 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr12:11309400-11321200 Weak transcription Fetal Lung lung
47 chr12:11309600-11319000 Weak transcription Fetal Intestine Large intestine
48 chr12:11309800-11318400 Weak transcription Primary monocytes fromperipheralblood blood
49 chr12:11310000-11321200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr12:11310200-11321800 Weak transcription NH-A brain

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Last update: Aug 31, 2015