Variant report

Variant	rs35915553
Chromosome Location	chr8:63505242-63505243
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10086439	1.00[ASN][1000 genomes]
rs11986003	1.00[ASN][1000 genomes]
rs11988844	1.00[ASN][1000 genomes]
rs11990729	1.00[ASN][1000 genomes]
rs11993139	1.00[ASN][1000 genomes]
rs11994250	1.00[ASN][1000 genomes]
rs11997540	1.00[ASN][1000 genomes]
rs13248275	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13260313	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13268135	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13439148	1.00[ASN][1000 genomes]
rs13439149	1.00[ASN][1000 genomes]
rs16929324	1.00[ASN][1000 genomes]
rs16929355	1.00[ASN][1000 genomes]
rs16929366	1.00[ASN][1000 genomes]
rs16929379	1.00[ASN][1000 genomes]
rs16929380	1.00[ASN][1000 genomes]
rs16929392	1.00[ASN][1000 genomes]
rs16929407	1.00[ASN][1000 genomes]
rs16929409	1.00[ASN][1000 genomes]
rs16929424	1.00[ASN][1000 genomes]
rs16929428	1.00[ASN][1000 genomes]
rs17840589	1.00[ASN][1000 genomes]
rs2127562	1.00[ASN][1000 genomes]
rs2127563	1.00[ASN][1000 genomes]
rs2127564	1.00[ASN][1000 genomes]
rs28608015	1.00[ASN][1000 genomes]
rs2882923	0.91[EUR][1000 genomes]
rs34160114	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35029520	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4562311	1.00[ASN][1000 genomes]
rs56083055	1.00[ASN][1000 genomes]
rs57786242	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59113187	1.00[ASN][1000 genomes]
rs60508325	1.00[ASN][1000 genomes]
rs61408776	1.00[ASN][1000 genomes]
rs6472043	1.00[ASN][1000 genomes]
rs6997907	1.00[ASN][1000 genomes]
rs7007446	1.00[ASN][1000 genomes]
rs7016043	1.00[ASN][1000 genomes]
rs73682630	1.00[ASN][1000 genomes]
rs73682631	1.00[ASN][1000 genomes]
rs73683352	1.00[ASN][1000 genomes]
rs73685419	1.00[ASN][1000 genomes]
rs7820024	1.00[ASN][1000 genomes]
rs7839654	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs961828	1.00[ASN][1000 genomes]
rs9969432	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv890959	chr8:63449156-63515522	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63505000-63506200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links