The 2.0 version of rSNPBase

Variant report

Variant rs36078910
Chromosome Location chr17:43487217-43487218
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43472800-43487400 Weak transcription HUVEC blood vessel
2 chr17:43475800-43490400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr17:43479400-43489600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr17:43482400-43501600 Weak transcription HMEC breast
5 chr17:43483200-43496000 Weak transcription Hela-S3 cervix
6 chr17:43483400-43488800 Weak transcription Psoas Muscle Psoas
7 chr17:43483800-43487600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr17:43483800-43488800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr17:43484000-43487400 Genic enhancers Fetal Intestine Small intestine
10 chr17:43484200-43492400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr17:43484400-43488000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr17:43484400-43488600 Flanking Active TSS Primary B cells from cord blood blood
13 chr17:43484400-43502600 Weak transcription Fetal Lung lung
14 chr17:43484600-43487600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr17:43484600-43502200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr17:43485200-43487400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr17:43485200-43488600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr17:43485200-43490200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr17:43485400-43487400 Flanking Active TSS Primary monocytes fromperipheralblood blood
20 chr17:43485400-43487400 Flanking Active TSS GM12878-XiMat blood
21 chr17:43485400-43487800 Active TSS Brain Hippocampus Middle brain
22 chr17:43485600-43487400 Enhancers HSMMtube muscle
23 chr17:43485600-43487600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
24 chr17:43485600-43488400 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr17:43485600-43488400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
26 chr17:43485800-43487400 Flanking Active TSS Primary T cells fromperipheralblood blood
27 chr17:43485800-43487400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
28 chr17:43485800-43487800 Active TSS Brain Substantia Nigra brain
29 chr17:43485800-43488000 Active TSS Duodenum Smooth Muscle Duodenum
30 chr17:43485800-43488200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr17:43485800-43488400 Active TSS Rectal Smooth Muscle rectum
32 chr17:43486000-43487400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr17:43486000-43487400 Active TSS Adipose Nuclei Adipose
34 chr17:43486000-43488200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:43486000-43488600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr17:43486200-43488000 Transcr. at gene 5' and 3' Esophagus oesophagus
37 chr17:43486200-43488200 Flanking Active TSS Fetal Thymus thymus
38 chr17:43486200-43488600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr17:43486400-43487600 Active TSS Brain Anterior Caudate brain
40 chr17:43486400-43487800 Active TSS Skeletal Muscle Female skeletal muscle
41 chr17:43486400-43488200 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr17:43486600-43487400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr17:43486600-43487400 Active TSS Brain Cingulate Gyrus brain
44 chr17:43486600-43487400 Enhancers NHEK skin
45 chr17:43486600-43487800 Flanking Active TSS Right Ventricle heart
46 chr17:43486600-43488200 Flanking Active TSS Placenta Placenta
47 chr17:43486600-43489800 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr17:43486800-43487800 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr17:43486800-43488000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
50 chr17:43486800-43488000 Active TSS Liver Liver

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Last update: Aug 31, 2015