The 2.0 version of rSNPBase

Variant report

Variant rs36115605
Chromosome Location chr1:94047210-94047211
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94020800-94050600 Weak transcription Fetal Thymus thymus
2 chr1:94025400-94049400 Strong transcription Hela-S3 cervix
3 chr1:94025600-94073800 Weak transcription Fetal Brain Female brain
4 chr1:94031200-94047800 Weak transcription GM12878-XiMat blood
5 chr1:94031800-94052400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:94032000-94053600 Weak transcription Primary hematopoietic stem cells blood
7 chr1:94033000-94050000 Genic enhancers Skeletal Muscle Male skeletal muscle
8 chr1:94036400-94048600 Weak transcription Colon Smooth Muscle Colon
9 chr1:94038400-94047800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:94038400-94054000 Weak transcription Brain Substantia Nigra brain
11 chr1:94038400-94054800 Weak transcription Brain Angular Gyrus brain
12 chr1:94038600-94051800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr1:94038600-94054200 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:94040000-94055000 Genic enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:94040800-94047400 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:94041000-94049400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr1:94041200-94048800 Genic enhancers HMEC breast
18 chr1:94041800-94047600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:94041800-94047800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:94041800-94059400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:94042000-94054800 Weak transcription Primary B cells from cord blood blood
22 chr1:94042200-94048600 Enhancers Pancreas Pancrea
23 chr1:94042200-94063200 Weak transcription Brain Germinal Matrix brain
24 chr1:94042400-94047400 Weak transcription Brain Cingulate Gyrus brain
25 chr1:94042800-94047600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:94042800-94050600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:94042800-94053000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:94043000-94058400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:94043200-94047400 Weak transcription Aorta Aorta
30 chr1:94043200-94049800 Weak transcription Fetal Kidney kidney
31 chr1:94043200-94050400 Strong transcription NHEK skin
32 chr1:94043400-94047800 Genic enhancers Fetal Intestine Small intestine
33 chr1:94044600-94047400 Enhancers HepG2 liver
34 chr1:94044600-94047800 Enhancers Fetal Intestine Large intestine
35 chr1:94044600-94049800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:94044800-94047800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:94044800-94049600 Genic enhancers Skeletal Muscle Female skeletal muscle
38 chr1:94045000-94047600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:94045000-94050400 Genic enhancers A549 lung
40 chr1:94045200-94047800 Weak transcription Rectal Smooth Muscle rectum
41 chr1:94045400-94050200 Weak transcription Psoas Muscle Psoas
42 chr1:94045400-94053600 Weak transcription Brain Hippocampus Middle brain
43 chr1:94045600-94047400 Strong transcription Fetal Muscle Leg muscle
44 chr1:94045600-94047600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:94045600-94047600 Weak transcription Right Ventricle heart
46 chr1:94045600-94047600 Weak transcription Spleen Spleen
47 chr1:94045600-94048400 Strong transcription Stomach Smooth Muscle stomach
48 chr1:94045600-94050200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:94045800-94047400 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:94045800-94047400 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015